Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271882g00001 ATGCAAAACTCAGTTCCTGCTATCACTTTCATCTTGGCCTTAACTTTAAGACTTGAGAAAGTGAACATGACAAGAAAAAATGGATTAGCAAAAGTTATAGGAACCATTGCAAGTGTTGGTGGTGCCACCATTATTACTCTATACAAAGGTCCTCCTCTTCTTCACCAAACACATGGAAGCAGAAGCACCTTACAAGGAGATCATAATTTTGAAGAAATGCAGCAAAATTGGAGATGGGGTTGCATATACTTGCTTGGACAATGTTTTTCATGGGCTGGTTGGATGGTTTTTCAGGCTCCTGTGGTGAAGAAGTATCCGGCGAAACTATCGCTCACGGCGTTCACATGCTTCTTCGGATTGATCCAATTCTTGATCATAGCAGCGTTTGTAGAAACTGACTTACAAAATTGGAAGATAGCATCATTGCAGGAGCTTTTCCTCATTCTATATGTAATTGTATCATCTGCAATTGTCATATTTCTCCAAACATGGCGTATCCAAAAGGGTGGCCCTGTGTTTGTTGCTGCCTTTCAGCCATTGCAAACAGTCCTAGTAGCTCCATGA 564 0.4113 MQNSVPAITFILALTLRLEKVNMTRKNGLAKVIGTIASVGGATIITLYKGPPLLHQTHGSRSTLQGDHNFEEMQQNWRWGCIYLLGQCFSWAGWMVFQAPVVKKYPAKLSLTAFTCFFGLIQFLIIAAFVETDLQNWKIASLQELFLILYVIVSSAIVIFLQTWRIQKGGPVFVAAFQPLQTVLVAP 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271882g00001 187 Pfam EamA-like transporter family 79 185 IPR000620 GO:0016020
Stsc271882g00001 187 PANTHER WAT1-RELATED PROTEIN 1 186 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271882g00001 Stsc-Chr271882 2182 3506 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271882g00001 1 186 Nodulin-like Gene Family AT3G18200 61.170 3.22e-77 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271882g00001 - - qsa:O6P43_005135 282.722