Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271881g00020 ATGGCATCTCCCCAACCAATTATAAACACTCCAGAAACTTCCACCACTAACCCCCAAACTACCTCCCTCCCCGATTCCGATTCAAATCCCAACAAACGCCGCAAAATCGCCCACGCCTCTCCCGCCCACGCCGAATTCCTCAATCACATCAACTGGACATCCCAATCCGAGCAGCAGATCTACTCCGCCAACCTCCTCCGTACCCTCCGCCAAGTCCTCCGCCGCAACCCTTCTCCCTCCACCACACCATCAAAGTCCCGCCAGGTTCGTTACGCCGCCGACAGAGTCCTCGCCGCCGCCGCCAAAGGAAGAACGTGCTGGAGCCGCGCCATCCTCTCATCTCCTCCTCCCTTCAATCTCCGCCGGCTGCACCGCCACAAGAAGGCCCCCGACGCCAAGAAGAAGGTTACCGGATTGAGAAGTTTGCGTAACGGAACGGAAAAGAGGAAGTTACCGGCTGTTCAGAGGAAAGCGCGCGTTCTCAGCCTGTTGGTTCCCGGTTGCCGGAAGGTATCGTTTCCGAACCTTCTAGAAGAAGCCACTGATTATATCTCCGCCTTGGAGATGCAAGTGCGCGCCATGACTGCTCTCGCCGAGTTACTCTCTGGTGGTGACTCGCCGAGTGGACTCGCCGCTGAATCGTTAAGTTGA 651 0.573 MASPQPIINTPETSTTNPQTTSLPDSDSNPNKRRKIAHASPAHAEFLNHINWTSQSEQQIYSANLLRTLRQVLRRNPSPSTTPSKSRQVRYAADRVLAAAAKGRTCWSRAILSSPPPFNLRRLHRHKKAPDAKKKVTGLRSLRNGTEKRKLPAVQRKARVLSLLVPGCRKVSFPNLLEEATDYISALEMQVRAMTALAELLSGGDSPSGLAAESLS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271881g00020 216 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 54 201 IPR044660 GO:0006355
Stsc271881g00020 216 CDD bHLH_AtIBH1_like 147 198 IPR044549 GO:0006355
Stsc271881g00020 216 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 139 203 IPR036638 GO:0046983
Stsc271881g00020 216 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 138 187 IPR011598 GO:0046983
Stsc271881g00020 216 MobiDBLite consensus disorder prediction 1 27 - -
Stsc271881g00020 216 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271881g00020 Stsc-Chr271881 171375 172025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271881g00020 52 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 49.342 2.27e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271881g00020 - - adu:107465172 327.405