Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271881g00016 ATGTCCGACGACAAAGACAGAGACCAATACGGGGTGCTTCTCTACTACAAGTATGCCAACATCCCCAATCTCGAAGACCTCCTCTCCTTTTACCAATCCAACTGCTCCCAACTCTCCCTCCTCGGCCGCGTCCGCCTCTCTTCCCGCGGCGTCAATGTTACTGTTGGTGGCAAGTTGTCGAGCTTGGAGAGCCACATTGAAGCCCTCAAGGCCAAGGACCCTGTCTTCGAAACCACTGATTTCAAGCTTGCTACTTGTCATGAGCCGCTAAACGATAGGGTCGCCAAGGAGTGTGGATTCACTTCTCTCTCCATTCGAATTGTCGAGGAACTTGTTACTCTCAGTTCTCATCCCCTGTTAAAGTCGCCGGAAATTTCAAATGCTGGAAGACACCTTTCTGCATCTGAGTTTCATTCTTCTCTTCAAAATGCTGATCAGAAGACTCCAAGAGACGACCTTTTGTTACTTGATGCAAGGAATCTGTATGAAACAAGAATTGGGAAATTCCATGCACCAAATATTGAAACTCTGGATCCACAAGTTAGGCAGTATAGTGATTTGTCCTCATGGATAGATGATAATAGTGAGAAGTTGAAAGGAAAACACGTCCTTATGTATTGTACTGGAGGAATAAGGTGTGAAATGGCATCTGCATATATTAAGTCTAAAGGTGCTGGCTTTGAGAATGTGTTTCAGTTGTTTGGCGGTATCCAACGGTATTTGGAGCAATTCCCAGATGGTGGTTTTTTCAAGGGAAAGAATTTTGTATTTGATCACCGGATTTCTGTTGGAAGTTCAGATACCGATGTTCTTGGTACCTGCCTTATTTGTCATTGTTCATTTGATGATTATTCTTCACGCTGCCGATGTACTCATTGTAGAATGCTTGTCTTGGTTTGTCATAATTGTCAGAATGAAGCTGCATCGTATGTTTGTGAGCTGTGCCAGAAACAGGGCAAAGCTATTAGTTCAATGCAGTTAATTGATAATGGTGAATTGAAAACCCCATTAGAAGGTGCTGAGTTGCAAAATTCATCTTCAAATGCTACAGTATCACCTCAAATGCCCAAGGGAGATGATGTGAGGCCCTCCAAAAAGCTTAGAATCTTATGCTTGCACGGGTTTCGGCAGAATGCTTCCAGTTTTAAGGGAAGAACATCTTCGTTAGCAAAAAAACTAAAGAAAATCGCTGAATTTGTTTTCGTGGATGCACCTCATGAGTTGTCATTCATTTATCAAACAACTTCGGCCGAAGATGTGGCTTGTGAATCATCTCCGTTACCCTCTAGTCCACCTCCACCTTCGGAGAATTGCAGGAAGAAATATGCATGGTTAGTAGCTCCCAATTTCGATGGAAGTAGTGATATTAATTGGAAGGTAGCAGAAGGCCCATTCGATCCACTTCAATACCAGCAACAAACGGATGGATATGGGAGCGGCGATGGCAGCTTTAATCTCTGCGCAACAAGAACAACTAAAAGGTGA 1485 0.4343 MSDDKDRDQYGVLLYYKYANIPNLEDLLSFYQSNCSQLSLLGRVRLSSRGVNVTVGGKLSSLESHIEALKAKDPVFETTDFKLATCHEPLNDRVAKECGFTSLSIRIVEELVTLSSHPLLKSPEISNAGRHLSASEFHSSLQNADQKTPRDDLLLLDARNLYETRIGKFHAPNIETLDPQVRQYSDLSSWIDDNSEKLKGKHVLMYCTGGIRCEMASAYIKSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDTDVLGTCLICHCSFDDYSSRCRCTHCRMLVLVCHNCQNEAASYVCELCQKQGKAISSMQLIDNGELKTPLEGAELQNSSSNATVSPQMPKGDDVRPSKKLRILCLHGFRQNASSFKGRTSSLAKKLKKIAEFVFVDAPHELSFIYQTTSAEDVACESSPLPSSPPPPSENCRKKYAWLVAPNFDGSSDINWKVAEGPFDPLQYQQQTDGYGSGDGSFNLCATRTTKR 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271881g00016 494 Pfam UPF0176 acylphosphatase like domain 11 110 IPR040503 -
Stsc271881g00016 494 Pfam Serine hydrolase (FSH1) 365 449 IPR005645 -
Stsc271881g00016 494 Gene3D - 121 275 IPR036873 -
Stsc271881g00016 494 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 123 263 IPR036873 -
Stsc271881g00016 494 Gene3D alpha/beta hydrolase 363 466 IPR029058 -
Stsc271881g00016 494 FunFam Rhodanese-like domain-containing protein 6 1 112 - -
Stsc271881g00016 494 MobiDBLite consensus disorder prediction 342 362 - -
Stsc271881g00016 494 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 4 478 IPR020936 -
Stsc271881g00016 494 ProSiteProfiles Rhodanese domain profile. 149 249 IPR001763 -
Stsc271881g00016 494 Gene3D - 1 112 - -
Stsc271881g00016 494 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 119 277 - -
Stsc271881g00016 494 SMART rhod_4 139 246 IPR001763 -
Stsc271881g00016 494 Pfam Rhodanase C-terminal 251 316 IPR022111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271881g00016 Stsc-Chr271881 129010 134020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271881g00016 5 477 Sulfurtransferasese or Rhodanese AT1G09280 64.905 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271881g00016 - - mtr:25484701 764.222