Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271881g00002 ATGGGGGCAATAGGGGGTGTGATTCCATTCTTGGCCATGGCAATTGTGCAATCAAGCTATGCTGGAATGACAATTACTTCAAAGCTTGCAATACAATCTGGCATGAGTCCTCTTGTGCTTGTTGCTTATCGCCAAATCTTTGCCACTCTCTCCCTTGCTCCCTTTGCTTATTGCTTTGAAAGGAATACGGTTCCCCGTATGACAAAACGCACGGCATTACAGATACTGGTATCCTCTTTCACAGGACAAGAGTTTTTGAGAATCAAAACAAGGGCAGGGCAAGCAAAGGTGGTAGGTACAGTTCTAAGTGTTGGTGGAGCTCTTCTTTTATCGTTTTACCATGGAAAGCCCCTTCGTCTTGGGGAATCAGGTATTCACTGGAAATTTGTTGAAGAAATGGAAAGAACAAGCTCCTCTGCTGCTCCAACCAACTTGCTTCTTGGCCCTTTCGCATTGATTGCCAGTTCTCTTGTTTGGTCTGTCTGGTTCATAGTTCAAGCAGAGATGAGCAAGAATTACGCAGCTCCATATACGAGCAGCCTCTACATGTGTATGATGGCAAGCATTCAGTGTGTGGCCATTGCTTTGTGTTCTGACCACACCCTCTCAGCTTGGTCACTACACAATCCCATCAGACTCTCCTCTGCACTTTACGCAGGAATTGTGTGCACTGGGCTAGCGTACGGGGTGATGGCGTGGACAATTGAAAGAAAGGGGCCTCTCTATGTCTCTGTATTCACCCCTTTGATGCTTGTTATCACAGCTCTTGTCACCTGGGCTCTGCTTCATGATCAACTCTACGTTGGAACTGCCATTGGATCTGTTATTATAGTTTTGGGGCTCTATGCTGTTCTGTGGGGAAAGAGCAAAGAGATGAACAAGAAAAAGGGTGTTCAAGTGACATTAACAGATTCAGATTCAATAACCAGGGATAAGGATAAAGAAGAAGATGATGATGATATGAGTGAAATGGAAAAGCAGTGCTGTGACCATTCCAATTGTAACCATAATAATGCTGCTGCTACATGA 1029 0.448 MGAIGGVIPFLAMAIVQSSYAGMTITSKLAIQSGMSPLVLVAYRQIFATLSLAPFAYCFERNTVPRMTKRTALQILVSSFTGQEFLRIKTRAGQAKVVGTVLSVGGALLLSFYHGKPLRLGESGIHWKFVEEMERTSSSAAPTNLLLGPFALIASSLVWSVWFIVQAEMSKNYAAPYTSSLYMCMMASIQCVAIALCSDHTLSAWSLHNPIRLSSALYAGIVCTGLAYGVMAWTIERKGPLYVSVFTPLMLVITALVTWALLHDQLYVGTAIGSVIIVLGLYAVLWGKSKEMNKKKGVQVTLTDSDSITRDKDKEEDDDDMSEMEKQCCDHSNCNHNNAAAT 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271881g00002 342 PANTHER WAT1-RELATED PROTEIN 9 82 IPR030184 GO:0016020|GO:0022857
Stsc271881g00002 342 Pfam EamA-like transporter family 147 285 IPR000620 GO:0016020
Stsc271881g00002 342 MobiDBLite consensus disorder prediction 302 342 - -
Stsc271881g00002 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 190 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271881g00002 Stsc-Chr271881 9245 12831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271881g00002 7 321 Nodulin-like Gene Family AT1G09380 46.045 2.89e-112 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271881g00002 - - ahf:112709006 447.973