Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271879g00006 ATGGTATCAATCATAGCATCTTATGTAGTTATTCCAAAAGAAGAAACTCCAAAGAGTCTTTTCTTCTTGTCAGAGAATGACCAAATGTGGCGTTGGAGTCATGCTACCACAATCTACGTTTACAATAACAACAACAACAATGTGAATGTGAATGAGCTTGTTCAAAGAATGAGAGAGTCCCTTAGCCACATTCTGGTTCACTACTATCCATTATGTGGACGGTTGAATTGGACAGAAGGTGGCCGTTTGAGAATGGATTGTAACGCAAAGGGAGCCATCCTGCTTCAAGCTCAATCCACCAAATCAATTCATGAATATGGAGACTTCTCACCAAATGATGATAACATCAAAGAACTCATACCAAAGCTTGATTACTCTCAACCCATAGATGACATGCCTCTGTTCCTGGCACAAGTCACAAAATTCCATGGTGATGGTAATGCCTTTGCTATAGGAATTGCCATATCTCATACAATGAGTGATGGGGTTTCGAGCATTCACTTCATCAACTCATGGGCCAAACTCACCAGAGGAGACACATTGGACCCAAATGAATTGCCATTTCTCGACCGGACGGTGTTCACAGCCTCTAGCCTGCCGGCGTTGCGGTGTTTCGACCACCCGGAGTTTAATCCTCCACCACTCATCCTTGGAAGAACAGACAACATAGAAGAACAAAAGAAGAAGACAAGGGCTACAATGTTGAAACTAACAGCAAAACAGGTGCAGGAGTTGAAGCAAAATGCAACTATTGGTTATTCTGAATCCCATCAGAGACCCTACAGCAGATTTGAAGCCATTGGAGCACATATATGGCGATGTGCTTGTAAGGCTCGCGAGCAGGACAAAAATCAACCAACCTTAGCGAAGACGGTCGTTGATATTCGCAACAAGGTGAATCCTCCTCTGCCAAAAAACTATTTTGGAAATGCTTTAGCTAACACTGTGACATCAACATGCTGCGTTGGAGATATCATATCAAAGCCGCTGGGTTATGCTGCAAAAAAAATAAGAGAAGCAGTGGAAAGGGTTTCAAATGACAAGTACATAAGATCACAGCTACAGTTTGTAGCGCGACAAGAGCGAATGGATATGATTAGGACTCAGTTCTTTGAAAGAGGAGAGTACAGAGCAAATTTGTCCTTCTTTGGGAACCCTAATATTACACTTGGAAGTTGGATGCGTATGCCGGTGTATGAAGCAGATTTTGGTTGGGGAAAGCCAGATTATTTTGGTCCAGCCTATGTGTCTCCCTTCGATATTGGAATTGTGACTCTAAGCCCTGAAGGGGATGGCTCCATTGTTGTCTTACTGTGTTTTCAAATAGAACACATGCATAATTTCATCAAGCACTTTTGGGATAATTTATGA 1371 0.4238 MVSIIASYVVIPKEETPKSLFFLSENDQMWRWSHATTIYVYNNNNNNVNVNELVQRMRESLSHILVHYYPLCGRLNWTEGGRLRMDCNAKGAILLQAQSTKSIHEYGDFSPNDDNIKELIPKLDYSQPIDDMPLFLAQVTKFHGDGNAFAIGIAISHTMSDGVSSIHFINSWAKLTRGDTLDPNELPFLDRTVFTASSLPALRCFDHPEFNPPPLILGRTDNIEEQKKKTRATMLKLTAKQVQELKQNATIGYSESHQRPYSRFEAIGAHIWRCACKAREQDKNQPTLAKTVVDIRNKVNPPLPKNYFGNALANTVTSTCCVGDIISKPLGYAAKKIREAVERVSNDKYIRSQLQFVARQERMDMIRTQFFERGEYRANLSFFGNPNITLGSWMRMPVYEADFGWGKPDYFGPAYVSPFDIGIVTLSPEGDGSIVVLLCFQIEHMHNFIKHFWDNL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271879g00006 456 Gene3D - 219 455 IPR023213 -
Stsc271879g00006 456 Gene3D - 1 212 IPR023213 -
Stsc271879g00006 456 Pfam Transferase family 1 452 - -
Stsc271879g00006 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271879g00006 Stsc-Chr271879 34324 37898 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271879g00006 2 454 Monolignol Biosynthesis Gene Families AT5G48930 33.775 1.64e-83 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271879g00006 K13065 - gmx:100779814 513.457