Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271877g00029 ATGGGAAGCAAAGATGTGAAGTTGGTGAGCTTTTGGGTGAGTCCTTTTGGTAAAAGAGTTGAGTGGGCATTGAAGCTGAAGGGTGTGGAATATGAGTACATAGAAGAAGATATATACAACAAGAGCAACCTCCTTCTTGAGCTGAATCCGGTTCACAAGAAGGTTCCTGTTCTTGTTCATGGCAACAAGGTAATCTCAGAGTCATTTGTGATCCTTGAATACATCGATGAAACATGGAAGCAGCATCCATTGCTGCCTCAGGATCCTTATCAAAGAGCTCATGCTCGCTTTTGGGCTAATTTTGCTGAACATAAGTTATTGTATGCTGCATTCATTGCAATGGTGGCGAGCAGGGATGACACCGAAAAGGCTCTGAATGTAGCAAGAGAATCAGTAGAAAAGATAGAACAAGAGATTAAGGGGAAGAAATTCTTTGGAGGAGACAACATAGGATACCTTGACATTGCACTTGGATGGATATCTTACTGGATCCCTGTCTATGAGGAAGTTGGATCAATGCAGATATTAGACCCTTTGAGATTCCCAGCCATCAATACATGGATGAACAATTTCCTCAACCACCCTGTGATCAAGGACAGATTACCCCATAGAGATGACATGGTTGTTTACTTCCGCGATCGCAAGAAGATTGTGTCTCCTGCTTACCATGGCTTGATGAAGTATCTTTGA 690 0.4246 MGSKDVKLVSFWVSPFGKRVEWALKLKGVEYEYIEEDIYNKSNLLLELNPVHKKVPVLVHGNKVISESFVILEYIDETWKQHPLLPQDPYQRAHARFWANFAEHKLLYAAFIAMVASRDDTEKALNVARESVEKIEQEIKGKKFFGGDNIGYLDIALGWISYWIPVYEEVGSMQILDPLRFPAINTWMNNFLNHPVIKDRLPHRDDMVVYFRDRKKIVSPAYHGLMKYL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271877g00029 229 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Stsc271877g00029 229 FunFam Tau class glutathione S-transferase 1 87 - -
Stsc271877g00029 229 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Stsc271877g00029 229 Gene3D Glutaredoxin 1 84 - -
Stsc271877g00029 229 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 211 IPR010987 -
Stsc271877g00029 229 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Stsc271877g00029 229 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Stsc271877g00029 229 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Stsc271877g00029 229 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 207 IPR045073 -
Stsc271877g00029 229 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Stsc271877g00029 229 CDD GST_N_Tau 6 79 - -
Stsc271877g00029 229 FunFam Tau class glutathione S-transferase 85 220 - -
Stsc271877g00029 229 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Stsc271877g00029 229 Coils Coil 118 138 - -
Stsc271877g00029 229 Pfam Glutathione S-transferase, C-terminal domain 107 195 IPR004046 -
Stsc271877g00029 229 Gene3D - 85 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271877g00029 Stsc-Chr271877 172731 178520 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271877g00029 3 214 Glutathione S-transferase Gene Family AT2G29420 44.811 1.13e-68 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271877g00029 K00799 - tpra:123914566 355.91