Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271877g00027 ATGGGAAGCAAAGATGTGAAGTTGGTGAGCTATTGGGCGAGTACGTTCGGTAAAAGAGTTGAGTGGGCATTGAAACTGAAGGGTGTGGAATATGAGTACATAGAAGAAGATATATACAACAAAAGCACCCTTCTTCTTGAGCTGAACCCGGTTCACAAGAAGGTTCCGGTTCTTGTTCATGGCAACAAGGCAATCGCAGAGTCATTTGTGATCCTTGAATACATCGATGAAACATGGAAGCAGTATCCGTTGAAGCCTCACCATCCTTATCAAAGAGCTCATGCTCGCTTTTGGGCTATTTCTGCTGAACAAAAGCTTGGGGAAGCGTCATGGAGTGCGCTAATTAAGAGCGGAGATGAAAAGGAAAAGGCTGTGAATAGAGCCTCAGAGGTACTTGAGAAGATAGAGGAAGAGATTAAGGGTAAGAAATTCTTTGGTGGGGACAACATTGGATATTTGGACATTGCACTTGGATGGATCCCATGTATGATTCCCTTTTTTGAGGAAGTTGGGTCAATGCAGATAATAGACCCTCTCAAATTCCCAGCCATCAATGAATGGATGACCAATTTCCTCAGCCACCCTGTGGTGAAGGACTCCTTGCCCCCAAGAGACAAGGCCCTTAATTACTTCCACTCTCTCAAAAACAAACACGCTCCTGAATCCTAA 669 0.4439 MGSKDVKLVSYWASTFGKRVEWALKLKGVEYEYIEEDIYNKSTLLLELNPVHKKVPVLVHGNKAIAESFVILEYIDETWKQYPLKPHHPYQRAHARFWAISAEQKLGEASWSALIKSGDEKEKAVNRASEVLEKIEEEIKGKKFFGGDNIGYLDIALGWIPCMIPFFEEVGSMQIIDPLKFPAINEWMTNFLSHPVVKDSLPPRDKALNYFHSLKNKHAPES 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271877g00027 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Stsc271877g00027 222 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Stsc271877g00027 222 Gene3D Glutaredoxin 1 84 - -
Stsc271877g00027 222 CDD GST_C_Tau 89 211 IPR045074 GO:0004364|GO:0006749
Stsc271877g00027 222 SFLD Main (cytGST) 2 219 - -
Stsc271877g00027 222 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Stsc271877g00027 222 SUPERFAMILY Thioredoxin-like 5 104 IPR036249 -
Stsc271877g00027 222 CDD GST_N_Tau 6 79 - -
Stsc271877g00027 222 Gene3D - 85 221 - -
Stsc271877g00027 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 210 IPR010987 -
Stsc271877g00027 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 208 IPR045073 -
Stsc271877g00027 222 Pfam Glutathione S-transferase, C-terminal domain 113 195 IPR004046 -
Stsc271877g00027 222 Coils Coil 118 138 - -
Stsc271877g00027 222 FunFam Tau class glutathione S-transferase 1 87 - -
Stsc271877g00027 222 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Stsc271877g00027 222 FunFam Tau class glutathione S-transferase 85 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271877g00027 Stsc-Chr271877 167647 168609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271877g00027 2 217 Glutathione S-transferase Gene Family AT2G29420 43.056 1.13e-64 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271877g00027 K00799 - gmx:547585 341.658