Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271877g00017 ATGGCATTGCCATTTGGATTAGAGACTCTGAACATCAAATGCAAGAGTGGGAAGGCCAAGATTCTTGGTACAATTGTGTGTGTAGGAGGGGCATTGTTGTTGACACTTTACAAAGGAAAGCCCTTGTTTGATGTTTCTCACTATGAATCAGCAGCACCAGCATCAGCAGCCATGAGATCTGCAATGAAGCAAGGCTCTTCTTCTCCACCTACTAGAATCATTGAGAAATGGAGCATTGGTGTAATAGCTTTGATTCTGGGAACACTGTTTTGGTCATCATGGTTTATCCTGCAATCAAATATAGGGAAGATGTATCCATGCCGGTATTCTAGCACAGCCATCATGACCTTGTTTGGAGCCATTCAATCAGCTATCCTTGCCTTTTCCACTGGCAGAGACTTGTCCATGTGGATCCCCAATGGCAAGATTCAAATACTCACTGTTCTCTATTCTGGTATGGTTGGGTCAGGGTTGTGCTATGTGGGGATGTCATGGTGTGTTAAGAAGAGGGGTCCTGTGTTCACTGCAGCATTTAGCCCTCTTGTTCAGATAATGTCAGCCATGATTGATATCCCAGTCTTGCATGAGCAGCTCCATCTAGGAAGTGTGTTGGGATCCATGTTGGTTATGGTGGGATTGTATATTCTTCTGTGGGTTTTACATATGGGCGATGCAATTTTTGGAGGGGGAGCATCACTTCACCGCCGCAGGCAGCAGCGACGAGCAAATGTAACGGAGACAGAGTCAGGGAAGGAAGAAGGAAGAAGGATTGAAGGCGAAGGAATCATTTATGAGGCTGATCAGGATTTCAAGATTCAAGAACCTGCAGCATTGTTCGTGCCCTAA 846 0.4539 MALPFGLETLNIKCKSGKAKILGTIVCVGGALLLTLYKGKPLFDVSHYESAAPASAAMRSAMKQGSSSPPTRIIEKWSIGVIALILGTLFWSSWFILQSNIGKMYPCRYSSTAIMTLFGAIQSAILAFSTGRDLSMWIPNGKIQILTVLYSGMVGSGLCYVGMSWCVKKRGPVFTAAFSPLVQIMSAMIDIPVLHEQLHLGSVLGSMLVMVGLYILLWVLHMGDAIFGGGASLHRRRQQRRANVTETESGKEEGRRIEGEGIIYEADQDFKIQEPAALFVP 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271877g00017 281 Pfam EamA-like transporter family 79 217 IPR000620 GO:0016020
Stsc271877g00017 281 SUPERFAMILY Multidrug resistance efflux transporter EmrE 137 218 - -
Stsc271877g00017 281 PANTHER WAT1-RELATED PROTEIN 2 219 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271877g00017 Stsc-Chr271877 94196 96683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271877g00017 1 217 Nodulin-like Gene Family AT4G01440 41.475 2.29e-60 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271877g00017 - - gmx:100791663 338.961