Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271876g00009 ATGGCTGCAAATCAAGAAGATGTGAAGCTCTTGGGGGCTGTAGCAAGCCCATTTGTTTTCAGGGTGCAACTTGCTCTCAAGCTTAAGGGAGTTGAATACACATTTGTTGCACAGGATTTGAAGAACAAGAGTGAAGAGCTTTTAAAATTCAACCCGGTTCACAAGAAGGTGCCAGTGCTTGTTCACAATGAAAAGCCCATCAATGAATCACTTGTCATTGTTGAGTACATTGATGAGGCTTGGAAGAGTTACCCCATCTTACCTTCTCATCCTTACCAACGAGCCGTGGCTCGTTTCTGGGCCAAGTTCATAGATGACAAGGTTGTTAATTCTTCACGGAGAGCTGCTTTCACGGTTGACAAGGAAGAGCGTGAGAAGAACGCCAAGGAAGCAGTCGAGGCTCTACAGGTTTTGGAGAATGAGCTCAAAGGAAAGTTCTTTGGAGGAGAGGAACTTGGCTTTGTGGACATTGCTGCTTCTTTCATAGCATATTGGATCCCTCTAATCCAAGAAGTAGCAGGGTTACAATGGTTTAGCAGTGAACAATTTCCTAAACTCTACAATTGGAGCCAAGAATTTCTGAACCATCCAATTGTCAAGGAAGATTTGCCTCCTAGAGACCCACTTTTTGCATTATTAAAAGCTCGTTACGAGAGCATTCATGCTTCAAATTAG 675 0.4341 MAANQEDVKLLGAVASPFVFRVQLALKLKGVEYTFVAQDLKNKSEELLKFNPVHKKVPVLVHNEKPINESLVIVEYIDEAWKSYPILPSHPYQRAVARFWAKFIDDKVVNSSRRAAFTVDKEEREKNAKEAVEALQVLENELKGKFFGGEELGFVDIAASFIAYWIPLIQEVAGLQWFSSEQFPKLYNWSQEFLNHPIVKEDLPPRDPLFALLKARYESIHASN 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271876g00009 224 Gene3D - 90 224 - -
Stsc271876g00009 224 FunFam Glutathione S-transferase GSTU6 3 87 - -
Stsc271876g00009 224 Coils Coil 121 141 - -
Stsc271876g00009 224 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Stsc271876g00009 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Stsc271876g00009 224 CDD GST_N_Tau 8 81 - -
Stsc271876g00009 224 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Stsc271876g00009 224 SFLD Glutathione Transferase (cytosolic) 4 222 IPR040079 -
Stsc271876g00009 224 FunFam Tau class glutathione S-transferase 87 223 - -
Stsc271876g00009 224 Pfam Glutathione S-transferase, C-terminal domain 115 197 IPR004046 -
Stsc271876g00009 224 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Stsc271876g00009 224 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Stsc271876g00009 224 Gene3D Glutaredoxin 1 89 - -
Stsc271876g00009 224 SFLD Main.3: Omega- and Tau-like 4 222 IPR045073 -
Stsc271876g00009 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 207 IPR045073 -
Stsc271876g00009 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 217 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271876g00009 Stsc-Chr271876 64939 66495 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271876g00009 4 223 Glutathione S-transferase Gene Family AT3G09270 52.232 3.52e-78 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271876g00009 K00799 - gmx:100500680 323.939