Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271876g00003 ATGGCTCAGGAAGATGTGAAGCTCTTGGGGGTTATTGGAAGCCCGTTTATTTGCAGGGTTCAGATTGCTTTAAAATTGAAGGGAGTTGAATACCAGTTTGTGCCACAAGATTTGCAGAACAAGAGTGAAGAGCTCTTAAAATTCAACCCAATTCACAAAAAGGTGCCAGTTCTTGTTCATAATGAGAGGGCCATAAATGAGTCACTTGTGATTGTTGAGTATATTGATGAGGTTTGGAAGGGCAAATCCATTTTACCTACTGATCCTTACCAGAGAGCCTTGGCACGTTTCTGGGCCAAGTTCATAGATGACAAGATTTATAGTGCTGCATGGAAATCTGTTTTCACTGTTAATAAGGAAGAGCGTGAGAAGAACATTAAAGTATTACACGAAATTTTTCAATTTCTTGAAGATGAACTTAAAGACAAGTTCTTTGGAGGAGAGAAATTTGGCTTTGTGGACATTGCCGCTATATATATTGCATTTTGGGTGCCTATACTTCAAGAAACTGCAGGATTGCAACTATTCACAAATGAAAAATTTCCTAAACTTTATAAATGGAGCCAGGAATTTATGAATCAGCCAACAATCAAAGAATGTTTGCCTCCTAGAGACCCAATTTTTGCCTTCTTCAAAGGTCGCTGTGAAAGCCTTCTTGCTTTAGCAAATTAA 672 0.3824 MAQEDVKLLGVIGSPFICRVQIALKLKGVEYQFVPQDLQNKSEELLKFNPIHKKVPVLVHNERAINESLVIVEYIDEVWKGKSILPTDPYQRALARFWAKFIDDKIYSAAWKSVFTVNKEEREKNIKVLHEIFQFLEDELKDKFFGGEKFGFVDIAAIYIAFWVPILQETAGLQLFTNEKFPKLYKWSQEFMNQPTIKECLPPRDPIFAFFKGRCESLLALAN 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271876g00003 223 FunFam Tau class glutathione S-transferase 85 221 - -
Stsc271876g00003 223 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Stsc271876g00003 223 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Stsc271876g00003 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Stsc271876g00003 223 SFLD Main (cytGST) 2 219 - -
Stsc271876g00003 223 Gene3D Glutaredoxin 1 87 - -
Stsc271876g00003 223 FunFam Tau class glutathione S-transferase 1 87 - -
Stsc271876g00003 223 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Stsc271876g00003 223 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Stsc271876g00003 223 Pfam Glutathione S-transferase, C-terminal domain 99 195 IPR004046 -
Stsc271876g00003 223 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Stsc271876g00003 223 CDD GST_N_Tau 6 79 - -
Stsc271876g00003 223 Gene3D - 88 221 - -
Stsc271876g00003 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 210 IPR010987 -
Stsc271876g00003 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 206 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271876g00003 Stsc-Chr271876 24806 26143 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271876g00003 3 220 Glutathione S-transferase Gene Family AT3G09270 52.036 1.23e-75 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271876g00003 K00799 - gmx:100500680 336.65