Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271876g00001 ATGGCTGAAGAAGATGTGAAGCTCTTAGGGGTTCTTGGAAGCCCGTTTGTTTGCAGGGTTCAGATTGCTCTAAAATTGAAGGGAGTTGAATACCAGTTTGTGCCACAAGATTTGCAGAACAAGAGTGAAGAGCTCTTAAAATACAACCCCATTCACAAGAAGGTGCCAGTGCTTGTTCACAATGAAAAGCCCATAAATGAATCACTTATCATTGTTGAGTATATTGATGAAGCTTGGAAGGGCAAATCCATTTTACCCGCTGATCCTTACCAGAGAGCCTTGGCACGTTTCTGGGCCAAGTTCATAGATGACAAGGTTTTTATTGCTGCCTGGAAATCTGTTTTCACTGTTGACAAGAACGAACGTGAGAAAAATGTTGAAGAAGTACACGAAGCTTTCCAGATCCTTGAAGATGAGCTTAAAGGCAAGTTCTTTGGGGGAGAGGAGTTTGGCTTTGTGGACATTGCCGCTGTAAATATTGCATTTTGGGTCCCTCTGATTCAAGAAGTTGCAGGATTGCAACTGCTCACTAATGAGAAATTTCCCAAACTTTACAAATGGAGCCAAGAATTTATGAATCAGCCAACAATTAAAGAATGTTTGCCTCCTAGAGACCCAATTTTTGGCTTCTTCAAAAGTCGATATGAAAACCTTCTTGCTTCAGCAAATTAA 672 0.4092 MAEEDVKLLGVLGSPFVCRVQIALKLKGVEYQFVPQDLQNKSEELLKYNPIHKKVPVLVHNEKPINESLIIVEYIDEAWKGKSILPADPYQRALARFWAKFIDDKVFIAAWKSVFTVDKNEREKNVEEVHEAFQILEDELKGKFFGGEEFGFVDIAAVNIAFWVPLIQEVAGLQLLTNEKFPKLYKWSQEFMNQPTIKECLPPRDPIFGFFKSRYENLLASAN 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271876g00001 223 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Stsc271876g00001 223 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Stsc271876g00001 223 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Stsc271876g00001 223 Gene3D Glutaredoxin 1 87 - -
Stsc271876g00001 223 FunFam Tau class glutathione S-transferase 85 221 - -
Stsc271876g00001 223 Pfam Glutathione S-transferase, C-terminal domain 98 195 IPR004046 -
Stsc271876g00001 223 SFLD Main (cytGST) 1 221 - -
Stsc271876g00001 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 205 IPR045073 -
Stsc271876g00001 223 Gene3D - 88 222 - -
Stsc271876g00001 223 Coils Coil 119 139 - -
Stsc271876g00001 223 SFLD Main.3: Omega- and Tau-like 1 221 IPR045073 -
Stsc271876g00001 223 CDD GST_N_Tau 6 79 - -
Stsc271876g00001 223 FunFam Glutathione S-transferase GSTU6 1 86 - -
Stsc271876g00001 223 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Stsc271876g00001 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 210 IPR010987 -
Stsc271876g00001 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271876g00001 Stsc-Chr271876 7729 9017 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271876g00001 3 221 Glutathione S-transferase Gene Family AT3G09270 50.901 5.92e-76 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271876g00001 K00799 - gmx:100500680 339.347