Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271875g00053 ATGGACTCCGTCACCGGCGCTCCGTCTCCCACCACCTCCGCAACTGCCGCTCCGCCGCGCCCGCCTCCGACTTCTTCGTCCCCGTTCTCCGGCCGCGAAGACTGCTGGAACGAGGACGCAACCTTCACCCTCATTGAAGCCTGGGGCGACCGTTACCTTGAGCTCAACCGCGGCAACCTCCGTCAGAAGCACTGGCAAGAGGTCGCCGATGCCGTCAACGAACTCCACGCAGGAGACGGCGGCGCCGGCCATGGAGAAACGGCGACTAACACGCCCAATCGAATTCGCCGGACCGATGTTCAGTGCAAAAATCGAATCGACACGCTCAAGAAGTACAAGATCGAGAAGGCTAGGGTTTACGAATCCGGCGGCGGTTACCAGAGCCCCTGGCCTTTCTTCTCCCGCCTCGACAATTTGATCGGTGATACTTTTCCGATCAAAAAGCTCTCGCCGCCGGCTACCGGCCGGGGAACCCCACCCTCCGCCGCCAAGCCCTTACCGTTTTCTCCGCCGGCGTGGATAACCTCTCATCCCGTCGGTCCCCGATCCGGCACTCAGAAACGCACGGCGGCCGTTCCGACGACAGCGCCGGCCAACCTTGAAGATTGTAATTTCCGGCGGAATTTCTCAGCCTTCGCAGCCGCAGCGGCTGCCGCCGCAGAAGCCGAGAGTGAAGATTCAGATGGCTGGAGGTCCGGCAGCTGTGGCGGAAGACGGAGGAGGACGAGGGGAATTGAGATGAAATGCTGGGAAGTTGGGTATAGGGAACTTGCTCAGGCGATTGAGAAGTTCGGAGAGATTTATCAGAGAGTTGAAGCTTCGAAGTAG 828 0.6027 MDSVTGAPSPTTSATAAPPRPPPTSSSPFSGREDCWNEDATFTLIEAWGDRYLELNRGNLRQKHWQEVADAVNELHAGDGGAGHGETATNTPNRIRRTDVQCKNRIDTLKKYKIEKARVYESGGGYQSPWPFFSRLDNLIGDTFPIKKLSPPATGRGTPPSAAKPLPFSPPAWITSHPVGPRSGTQKRTAAVPTTAPANLEDCNFRRNFSAFAAAAAAAAEAESEDSDGWRSGSCGGRRRRTRGIEMKCWEVGYRELAQAIEKFGEIYQRVEASK 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271875g00053 275 FunFam trihelix transcription factor ASIL2 36 114 - -
Stsc271875g00053 275 MobiDBLite consensus disorder prediction 1 34 - -
Stsc271875g00053 275 Pfam Myb/SANT-like DNA-binding domain 33 139 IPR044822 -
Stsc271875g00053 275 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 17 275 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271875g00053 Stsc-Chr271875 267537 270605 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271875g00053 31 219 Trihelix Transcription Factor Family AT3G14180 43.523 1.39e-33 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc271875g00053 Myb_DNA-bind_4 1.1e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271875g00053 - - lang:109355153 303.523