Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271875g00050 ATGGTGTTTAATGTGAAGAGGAATCCAGTGGAGCTAGTGGCACCTGCTGGCCCCACTCCCCATGAGCTTAAGCTTCTCTCTGACATTGATGACCAAAAGGGTCTTCGTTACCAACTTCCATTGGTGCTGTTCTTTCCTTGCAGCCCTTCAATGGAAGGAAAAGACCCTGTGCATGTCATCAGAGAAGCATTATCCAAAGCACTTGTGTTGTATTATCCATTAGCTGGGAGGTTTAGGGAAGGTCCTAGTGGCAAATTTATGGTGGATTGCACTGGTGAAGGTGTATTGTTCATCGAAGCTGATGCAGATGTTACACTTGAGCAGTTTGGTGTTGATCTTCTGCCTCCATTTCCTTGCTTTGATGAGATCCTCCATCATGCTCCATATTTTGATGATGGAATTATTAACTCTCCAATCCTGCTTATACAGGTTTAA 435 0.4414 MVFNVKRNPVELVAPAGPTPHELKLLSDIDDQKGLRYQLPLVLFFPCSPSMEGKDPVHVIREALSKALVLYYPLAGRFREGPSGKFMVDCTGEGVLFIEADADVTLEQFGVDLLPPFPCFDEILHHAPYFDDGIINSPILLIQV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271875g00050 144 Gene3D - 1 144 IPR023213 -
Stsc271875g00050 144 PANTHER ACYL TRANSFERASE 4 1 128 - -
Stsc271875g00050 144 Pfam Transferase family 10 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271875g00050 Stsc-Chr271875 246627 247061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271875g00050 1 144 Monolignol Biosynthesis Gene Families AT5G48930 35.374 5.29e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271875g00050 K19861 - gmx:100795237 224.942