Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271875g00014 ATGGCACCAGAGTATGCTATCGACGGGTTGTTTTCAGTAAAATCCGATGTCTTCAGCTTCGGCATATTAGTGATGGAGATTATAAGTGGGCTCAGAAACAGAGCACTTTGCCATGCAAATGAGACTCTAAATCTTGTTGGCTATGCTTGGACACTTTGGAAAGAGGACAGGGCTTTAGAATTGATTGATTCAAGCATGAAGGAGTTTTGCGTAATCTCGGAAGTAATGCGCTGCATCCATGTGAGTCTGTTGTGTGTTCAACAATACCCTGATGATAGGCCTACAATGGCGTCTGTAATTCTCATGTTAGGAAGCAAGATGGATTTAGTTGAACCAAAAGAGCCTGGATTCTTTCCCAAGAATGTCTCATTTGAAGCGAATTCAATCACAAATAAATGTGAAATGTCTACAAACAATGCATTAACCATTACCTCATTAGATGGCAGGTGA 450 0.4089 MAPEYAIDGLFSVKSDVFSFGILVMEIISGLRNRALCHANETLNLVGYAWTLWKEDRALELIDSSMKEFCVISEVMRCIHVSLLCVQQYPDDRPTMASVILMLGSKMDLVEPKEPGFFPKNVSFEANSITNKCEMSTNNALTITSLDGR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271875g00014 149 SUPERFAMILY Protein kinase-like (PK-like) 1 137 IPR011009 -
Stsc271875g00014 149 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 148 - -
Stsc271875g00014 149 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 1 108 - -
Stsc271875g00014 149 Gene3D Transferase(Phosphotransferase) domain 1 1 114 - -
Stsc271875g00014 149 Coils Coil 143 149 - -
Stsc271875g00014 149 Pfam Protein tyrosine and serine/threonine kinase 1 100 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271875g00014 Stsc-Chr271875 74840 75377 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271875g00014 1 149 Receptor kinase-like Gene Family AT4G23220 44.156 1.51e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc271875g00014 PK_Tyr_Ser-Thr 2.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271875g00014 - - ahf:112705446 257.684