Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271873g00028 ATGACTTTCAAGCGCAGAAACGGCGGAAGAAACAAGCATGGCCGCGGCCACGTCAAATTCATCCGTTGCTCCAACTGCGGCAAATGCTGCCCTAAGGACAAATCGATCAAGCGGTTCCTCGTGAGGAACATTGTTGAGCAAGCTGCTGTTCGTGATGTTCAGGAAGCCTGCGTCTACGAACAATACACTCTTCCGAAGCTGTACGTGAAGATGCAGTACTGTGTTTCGTGTGCCATCCACTCTCACGTTGTTAGGGTTCGTTCTCGCACCGATAGGAGGAACCGCGAGCCACCACAGCGCTTTGCCAGGCGCAGGGATGATGCACAAAGGCCCGGTCAGCCTGGTCAAGCACCTCGTCCCGCTGGTGGAGTTGGAGCTGCTCCTCGTGCTTAA 393 0.5496 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFARRRDDAQRPGQPGQAPRPAGGVGAAPRA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271873g00028 130 MobiDBLite consensus disorder prediction 89 110 - -
Stsc271873g00028 130 PANTHER 40S RIBOSOMAL PROTEIN S26 1 123 IPR000892 GO:0003735|GO:0005840|GO:0006412
Stsc271873g00028 130 MobiDBLite consensus disorder prediction 86 130 - -
Stsc271873g00028 130 FunFam 40S ribosomal protein S26 1 114 - -
Stsc271873g00028 130 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Stsc271873g00028 130 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Stsc271873g00028 130 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271873g00028 Stsc-Chr271873 210368 211862 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271873g00028 1 116 Cytoplasmic Ribosomal Protein Gene Family AT3G56340 83.621 7.26e-69 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271873g00028 K02976 - qsa:O6P43_020111 196.438