Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271872g00027 ATGTCCCTCCTCCGCCGCCTCCGGTTCTCGCTCCCTCTACTTCTTTCGCTTTCTCTTCTGCTCTCCCCTCCCCCCACTCCAATCGTCATGGATCCAATTCCAAACCCTAGCACTACCACCACCGCTTCCACTGTCAGCCACGACGAAAACGGCGTCGTTAATGATTTCGGCTTGTTGGAGGAAGAGGAGTTTCAGATGCAATTGGCTCTTGCGATCAACGCCTCCGATCCCGATGTCCATAAAGACCCTGAATCTGCGCAAATCGATGCCGCCAAACAGATCAGCCTCGGATATGAAGCTTCTCTTTCTGATACTCAAGGACTCGTTCAATTTCAGTCCCTTCGTTATTGGAATTATAATGTCATTGGTTATGAGGAGAAAGTGATGGACGAGTTTTATGATGTTTATGGCATCACCTCAAATTTGACTGAATGGGAAAAGATGTCGTTGTTGGTGGATCTGCAAACGACACACATCTCAAGAAATCTTGATTGTGAAGTGATTGTGGTGAATCGCACATGGATTCACTCATGA 534 0.4738 MSLLRRLRFSLPLLLSLSLLLSPPPTPIVMDPIPNPSTTTTASTVSHDENGVVNDFGLLEEEEFQMQLALAINASDPDVHKDPESAQIDAAKQISLGYEASLSDTQGLVQFQSLRYWNYNVIGYEEKVMDEFYDVYGITSNLTEWEKMSLLVDLQTTHISRNLDCEVIVVNRTWIHS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271872g00027 177 Pfam Ethylene-responsive protein kinase Le-CTR1 110 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271872g00027 Stsc-Chr271872 269080 270113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271872g00027 55 172 MAP Kinase Kinase Kinase AT5G11850 58.475 5.72e-38 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271872g00027 K04424 - gmx:100779790 187.193