Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271872g00026 ATGGAATCGGTTGTTGGATGGGCTCATCACTATGGCATGGAGGAGGCGCAACTAAGCCAGACAGATTCGGCGAGCAAAGACGAAGGTCTATGGAGTTATGCGGGGACAGAAGCGGCCACCGTGTCTGTGGAGGATCAAAACACGTTAGATAGGAGAGAAATTGAAAGAGAGGGTGCAACTGCAGCCGGCCCGGTAGAAGAGGGAAGCCCACAGATGGAGAGGGGTGGACTGTTGGAGGGTGTCTTTGAGGGCGTCGAGGACGCCTATAACAGATATGTGGCGTATGCAAGGACCACTGGCTTTGCTGTCCGAAAGGGGAACTCCGTGAAGGATGAAAGTGGCAACATTGTCAGGAAGTTCTTCTACTGCAATAGGCAAGGGTTAAGGGAGAAGAAGCACTATGAAAGGCCAGATAGAAAAAGAGCGCATAAAGCAGAGATAAGAACCAATTGCTATGCGAAGTAA 465 0.5075 MESVVGWAHHYGMEEAQLSQTDSASKDEGLWSYAGTEAATVSVEDQNTLDRREIEREGATAAGPVEEGSPQMERGGLLEGVFEGVEDAYNRYVAYARTTGFAVRKGNSVKDESGNIVRKFFYCNRQGLREKKHYERPDRKRAHKAEIRTNCYAK 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271872g00026 154 Pfam FAR1 DNA-binding domain 92 153 IPR004330 -
Stsc271872g00026 154 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 30 153 - -
Stsc271872g00026 154 MobiDBLite consensus disorder prediction 54 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271872g00026 Stsc-Chr271872 266230 266694 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc271872g00026 FAR1 1.2e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271872g00026 - - adu:107470907 133.65