Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271872g00017 ATGTCATCACTAGCGGTGCTTGAAGCACTAGACTCAGCAAAAACGCAATGGTACCATGTAACCGCCATAGTGATCGCCGGAATGGGATTCTTCACGGATGCCTACGACCTCTTCTGCATCTCCACAGTCTCGAAACTCCTCGGCCGATTGTACTACTTCGACCCAAACTCGGGGAAACCGGGAAAGCTTCCAACAACGGTGAACAACTTTGTGACCGGGGTGGCACTGTTTGGAACTCTAACAGGGCAGTTAGTGTTTGGTTGGTTAGGTGACAAGCTAGGGCGCAAGAAGGTGTACGGTATAACCCTCATCATCATGGTTATGTGCGCCATCTTCTCCGGCCTGTCCTTTGGTCTTACTGCTAAATCTGTCATGATCTCCCTCTGCTTCTTCAGGTTTTGGCTAGGGTTTGGCATAGGTGGAGACTACCCTCTTTCTGCAACGATCATGTCTGAATATGCCAACAAGAGGACGCGTGGCGCTTTCATTGCGGCGGTGTTCGCCATGCAAGGCGTGGGGATCATTTGCGCCGGTCTAGTGTCGATGATCCTCTCAGCTCTCTTTTTGCAAAACTACCCTGCTCCGTCGTTTAACGAGGACCATGTACTCTCAACTCAACCAGAAGGCGATTTTCTATGGCGTATTGTGCTCATGCTCGGTGCGGTGCCAGCATTGCTAACATTCTATTGGAGGATGAAGATGCCAGAAACCGGTCGCTACACAGCTTTGATCGAAGGGAATGCAAAGCAAGCCGCGACGGACATGGCTAGGGTTTTGGACATCGAGATTCTCGCAGAACAAGAGAAGGTAGCTCAGTTTAAATCTGTGAATCAATATCCTCTCTGGTCGAACGAGTTCTTTCAGAGACATGGTCGACACCTGATCGGAACCATGACCACGTGGTTCTTATTGGATATAGCTTTCTACTCTCAGAACCTTACTCAAAAGGATATCTTCCCTGCCATGGGGATGATTCCGGATGCGGTCAACATGAACGCCATTGAAGAAGTATTGAAAACTTCACGCGCTATGTTTTTAATTGCTTTCTTCGGAACCTTCCCTGGGTATTGGTTTACGGTTATCTTCATTGAGAAAATCGGAAGATTTAAGATCCAACTCATGGGTTTCTTCATGATGTCAGTGTTCATGTTCATCATTGGGGTCAAGTACGAGTACCTAAAAGACGAGAGTAAGACATTATTTGCTCTTCTTTATGGGTTGACGTTCTTCTTTGCGAATTTTGGGCCCAACAGCACGACCTTCGTGCTGCCTGCTGAGCTTTTCCCTACTCGCGTGAGGTCCACTTGTCACGCGCTGAGCGCTGCGGCGGGAAAAGCCGGCGCGATGGTGGGATCTTTCGGGATACAGAGTTATACGGTGAAAGGTGACTTGCATCAGATAAGTCGCGCCATGAAGATTCTGGCGGTGACAAACTTTTTGGGATTCTTGTGTACTTTCTTGGTCACCGAAACAAAGGGACGGTCCTTGGAAGAGATCTCCGGCGAAGATGGTAGAGAGAGTGAGCTCACTCAGTCAACAATTATGACCATGGAAAATGGTGGGCGTAATGGAAAACAAACGGAGATGATGTGA 1593 0.4846 MSSLAVLEALDSAKTQWYHVTAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPNSGKPGKLPTTVNNFVTGVALFGTLTGQLVFGWLGDKLGRKKVYGITLIIMVMCAIFSGLSFGLTAKSVMISLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGVGIICAGLVSMILSALFLQNYPAPSFNEDHVLSTQPEGDFLWRIVLMLGAVPALLTFYWRMKMPETGRYTALIEGNAKQAATDMARVLDIEILAEQEKVAQFKSVNQYPLWSNEFFQRHGRHLIGTMTTWFLLDIAFYSQNLTQKDIFPAMGMIPDAVNMNAIEEVLKTSRAMFLIAFFGTFPGYWFTVIFIEKIGRFKIQLMGFFMMSVFMFIIGVKYEYLKDESKTLFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAAAGKAGAMVGSFGIQSYTVKGDLHQISRAMKILAVTNFLGFLCTFLVTETKGRSLEEISGEDGRESELTQSTIMTMENGGRNGKQTEMM 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271872g00017 530 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 18 498 - -
Stsc271872g00017 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 22 493 IPR020846 GO:0022857
Stsc271872g00017 530 SUPERFAMILY MFS general substrate transporter 10 500 IPR036259 -
Stsc271872g00017 530 CDD MFS_PhT 23 492 - -
Stsc271872g00017 530 Gene3D MFS general substrate transporter like domains 18 517 IPR036259 -
Stsc271872g00017 530 Pfam Sugar (and other) transporter 23 500 IPR005828 GO:0016020|GO:0022857|GO:0055085
Stsc271872g00017 530 NCBIfam phosphate:H+ symporter 7 502 IPR004738 GO:0005315|GO:0006817|GO:0016020
Stsc271872g00017 530 FunFam Inorganic phosphate transporter 1-6 18 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271872g00017 Stsc-Chr271872 207024 209525 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271872g00017 2 502 Inorganic Solute Cotransporters AT5G43350 62.573 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271872g00017 K08176 - gmx:100805284 839.721