Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271871g00011 ATGCCAGATGTTCAGGCTCTTGTTAATGATTTTGTCAATCAACTTAAAAAACGTAAAATTGAAGGGTCTCAGGCCACAGCAAAGCAGACGGCTGAGTTGCTTCGTTCTGTGATTTCGCAGCAGCGGGTGCCACACACAAACCAGGCTGCAGCTTTGATTAATGCAGTAAGGGCAGTTGGGGAGCAGCTTATTGCTGCAAATCCTGTTGCAATTGACAAAGGTTCAAGAGGTCGGAAGTTGAAGCATGATGTTATTGAAGCAGTTAATGACCTTATTCAAGACATATCCACTTGCTATGAACAAATAGCTGAGCAAGCAGTAGAGCACATTCATCAAAACGAGGTAATATTAACACTGGGCAGTTCAAAAACAGTGTTGGAATTTCTTTGTGCTGCAAAGGAAAAAAAGAGATCATTTAAGGTCTTTGTTGCTGAGGGAGCACCAAGATATCAAGGACATCTCCTTGCAAAAGATTTGGCTGCTAGAGGCTTACAAACCACAGTAATTACTGATTCTGCAGTTTTTGCCATGATTTCCCGAGTTAACATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTGATTGCCCCGGTTGGGTTAAATATGGTTGCACTTGCAGCTCAGAGGCATGCTGTTCCATTTGTCATACTTGCTGGGAGTCACAAGTTGTGCCCTTTGTATCCGCACAATCCTGAAGTCCTACTGAATGAGCTGAGATCCCCATCTGAGCTACTTGACTTTGGGGAATTCTCANNNNNNNNNNTGGATTCTGCTAGTGGCGCTGGCTCTCTTCACATTGTTAATCCAACATTTGATTATGTGCCACCTAAACTCGTTAGTTTGTTTATCACTGACACTGGAGGGCATAACCCATCCTATATGTACCGACTCATAGCGGATTACTACTCAGCTGATGATCTGGTGGTGAAAGGAAGGCCTATGACAGGGAGTTGA 963 0.4341 MPDVQALVNDFVNQLKKRKIEGSQATAKQTAELLRSVISQQRVPHTNQAAALINAVRAVGEQLIAANPVAIDKGSRGRKLKHDVIEAVNDLIQDISTCYEQIAEQAVEHIHQNEVILTLGSSKTVLEFLCAAKEKKRSFKVFVAEGAPRYQGHLLAKDLAARGLQTTVITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVILAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSXXXXDSASGAGSLHIVNPTFDYVPPKLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKGRPMTGS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271871g00011 320 Gene3D - 98 304 IPR042529 -
Stsc271871g00011 320 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 309 IPR037171 -
Stsc271871g00011 320 FunFam translation initiation factor eIF-2B subunit beta 98 305 - -
Stsc271871g00011 320 Pfam Initiation factor 2 subunit family 19 294 IPR000649 GO:0044237
Stsc271871g00011 320 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 2 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271871g00011 Stsc-Chr271871 46596 52458 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271871g00011 1 86 Eukaryotic Initiation Factors Gene Family AT3G07300 70.930 1.48e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271871g00011 K03754 - gmx:100778545 462.996