Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271870g00037 ATGAGTGTGGTGGGGTTTGACATTGGGAATGAGAACTGTGTCATTGCTGTAGTGAAGCAAGGTGGGGTTGATGTTTTGTTGAATGAGGAATCCAAACGTGAAACCCCCGCTGTCGTCTGCTTTGGCGAGAAGCAACGGTTCCTGGGGTCGTCTGGTGCTGCTTCTGCTATGATGCACCCAAAGTCCACAGTGTCCCAAGTGAAGAGATTGATAGGGAGGAAATTTTCAGACCCTGATGTTCAAAAGGATCTCAAGATGCTCCCTGTTGAAACTTCTGAAGGCCCGGATGGTGGCATTCTGATTCACTTGAAATACTTGAAGGAGAATCATAGATTTACACCGGTTCAGATATTAGCAATGCTCTTTTCTCACTTGAAGACTATAGCCGAAAAAGATTTGGGGATGCCTGTTTCGGATTGTGTTATAGGGGTTCCGTCGTACTTCTCTGACTCGCAGCGACGGGCGTATCTAAATGCAGCAGCAATTGTTGGGTTGAAGCCTTTGAGATTGATTCATGATTGTACTGCAACTGGTATTGGTTATGGAATTTACAAAGCGGATTTTCGCGGTGCAGCCCCAATTTATGTTGCATTCGTCGACATTGGTCATTGTGATACTCAGGTCTCTATTGCAGCATTTCAGGCTGGGAAAATGAAGATGCTTTCGCATGCTTTTGACTGGAGCTTAGGTGGGCGAGACTTCGACGAGGTTTTGTTTAGTTATTTTGCAGCGAAATTTAGGGAACAATACAGCATTGATGTGTATTCTAATGCCAGGGCGTGTATCAGGCTGCGCTCGGCATGCGAGAAATTGAAGAAGGTTTTGAGTGCAAATGCAGAGGCACCTCTGAACATCGAGTGCTTGATGGACGAAAAGGATGTCAAGGGCATTATCAAGAGGGAAGAATTCGAGAAATTGGCATCTGGATTATTGGAGAGAATTCGTGTTCCTTGCAACAAAGCATTAGCTGATGCAGGCTTAACTGTAGAAAAGATTCATTCTGTTGAGCTAGTCGGCTCTGGTTCAAGGATTCCAGCTATAACCAGATTATTAACTTCTCTGTCCAAAAGAGAACCGAGCCGAACGCTGAATGCGAGCGAGTGTGTAGCACGTGGTTGTGCTCTTCAGTGTGCAATGCTCAGTCCTGCTTTACGTGTCAAGGAATACAAGGTCCAGGATTGTAGTCCTTTTTCCGTTGGACTTTCATCCGAGGAAGGTCCAATTTCTGCAGAACCAAAGGGTGTGATTTTCCCAAAAGGCCAACCTATTCCAACTGTTAAAACCCTTACATTTCGTTTCAGTAACTTGCTTCGTTTGGAAGCATTCTATGCTAATTCAAGTGAACTACCCCCTGGGATGTCTCCTAAAATTAGCCGCTTCACAATTGGTTTCCATGGATACCATTCTATTAGAATGGCGGAAGTTAAAGTTGGAGTTCAACTCAACTTGCATGGAATTGTCAGTATCAAATCAGCTAGAGTAATTACAACAGGTAATCATCATTCAGATTCCAAAGGAATGGAAGTTGAACACATTTCTGGGGAAGACAATAATGCCTTTTTACAGGCTGGTAGTACGGGGAAAGATAATGGTAACAAAAAGCTTCATGTACTAGTGAGTGAGGATACGTATGGTGGAATGACCAAGGCTGAGATATCAGAAGCTGAAGAAAAAGAAATCCGATTGGCCCAGCAGGACACTACAATGGAGCTAACCAAAGAAAAGAGGAATGCCTTGGAATCATACATCTATGAAACAAGGACTAAGCTTTTCAACACATATCGGAGCTTCGGAACCGAGGAGGAGAGGGATAGAATATCTAGGAGCCTGCGAGAGAGTGAAGAGTGGCTTTACGGTGATGGTGATGATGAAACCGTCCATGCTTATTCTGCTATACTGGAAGATCTAAGACAGCTTGTTAATCCAGTTGAGAATCGGTACAAAGATGAAGCAGCCAGAGTGGAAGCTATGAGAGATTTGTTAAGTTGCATTGTTAAGCACCGTGCATCTGCGGATTCTCTTCCACCTGAGCATAAAGAACAGATCATTAATGAGTGCGATAAAGCAGAACAATGGCTAAGAGAGAAGATGCAGCAACAAGATAACTTGCCTAAGACCTCTGATCTAGTATTTTGGTCAAGTGATATAAAGAGCAAGGCAGAGGAGTTGAAATTAGTGTGTCAGCAGATATTGGAAAACAAAGATACTTAA 2211 0.4355 MSVVGFDIGNENCVIAVVKQGGVDVLLNEESKRETPAVVCFGEKQRFLGSSGAASAMMHPKSTVSQVKRLIGRKFSDPDVQKDLKMLPVETSEGPDGGILIHLKYLKENHRFTPVQILAMLFSHLKTIAEKDLGMPVSDCVIGVPSYFSDSQRRAYLNAAAIVGLKPLRLIHDCTATGIGYGIYKADFRGAAPIYVAFVDIGHCDTQVSIAAFQAGKMKMLSHAFDWSLGGRDFDEVLFSYFAAKFREQYSIDVYSNARACIRLRSACEKLKKVLSANAEAPLNIECLMDEKDVKGIIKREEFEKLASGLLERIRVPCNKALADAGLTVEKIHSVELVGSGSRIPAITRLLTSLSKREPSRTLNASECVARGCALQCAMLSPALRVKEYKVQDCSPFSVGLSSEEGPISAEPKGVIFPKGQPIPTVKTLTFRFSNLLRLEAFYANSSELPPGMSPKISRFTIGFHGYHSIRMAEVKVGVQLNLHGIVSIKSARVITTGNHHSDSKGMEVEHISGEDNNAFLQAGSTGKDNGNKKLHVLVSEDTYGGMTKAEISEAEEKEIRLAQQDTTMELTKEKRNALESYIYETRTKLFNTYRSFGTEEERDRISRSLRESEEWLYGDGDDETVHAYSAILEDLRQLVNPVENRYKDEAARVEAMRDLLSCIVKHRASADSLPPEHKEQIINECDKAEQWLREKMQQQDNLPKTSDLVFWSSDIKSKAEELKLVCQQILENKDT 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271870g00037 736 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 549 647 IPR029048 -
Stsc271870g00037 736 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 385 580 IPR029047 -
Stsc271870g00037 736 PRINTS 70kDa heat shock protein signature 140 160 - -
Stsc271870g00037 736 PRINTS 70kDa heat shock protein signature 363 383 - -
Stsc271870g00037 736 PRINTS 70kDa heat shock protein signature 332 348 - -
Stsc271870g00037 736 PRINTS 70kDa heat shock protein signature 30 42 - -
Stsc271870g00037 736 PRINTS 70kDa heat shock protein signature 2 15 - -
Stsc271870g00037 736 PRINTS 70kDa heat shock protein signature 472 488 - -
Stsc271870g00037 736 PRINTS 70kDa heat shock protein signature 388 407 - -
Stsc271870g00037 736 FunFam Heat shock 70 kDa protein 4 1 76 - -
Stsc271870g00037 736 Gene3D Actin; Chain A, domain 4 230 313 - -
Stsc271870g00037 736 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 517 IPR029047 -
Stsc271870g00037 736 PANTHER HSC70CB, ISOFORM G-RELATED 1 733 - -
Stsc271870g00037 736 FunFam Heat shock 70 kDa protein 4 230 313 - -
Stsc271870g00037 736 FunFam Heat shock 70 kDa protein 4 547 657 - -
Stsc271870g00037 736 FunFam Heat shock 70 kDa protein 4 107 192 - -
Stsc271870g00037 736 Gene3D - 5 374 - -
Stsc271870g00037 736 SUPERFAMILY Actin-like ATPase domain 1 184 IPR043129 -
Stsc271870g00037 736 CDD HSPA4_like_NDB 2 381 - -
Stsc271870g00037 736 Gene3D - 186 360 - -
Stsc271870g00037 736 FunFam Heat shock 70 kDa protein 4 38 113 - -
Stsc271870g00037 736 Gene3D - 547 658 IPR029048 -
Stsc271870g00037 736 Gene3D - 38 113 - -
Stsc271870g00037 736 Pfam Hsp70 protein 3 647 IPR013126 GO:0005524|GO:0140662
Stsc271870g00037 736 SUPERFAMILY Actin-like ATPase domain 193 381 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271870g00037 Stsc-Chr271870 215912 219118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271870g00037 4 643 Calmodulin-binding Proteins AT1G16030 30.280 3.58e-89 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271870g00037 K09489 - gmx:100795914 1049.27