Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc271870g00026 | ATGCAGCATTTGAGTGGACAACCAAACATTGTTGAATTCAAAGGTGCTTATGAGGACAAGCATTCAGTTCATGTTGTCATGGAATTGTGTGCAGGTGGTGAGCTTTTCGATAGGATCATTGCAAAGGGACATTACAGTGAAAGAGCTGCAGCTTCAATATGCAGACAGATTGTGAATGTTGTTCATATTTGCCATTTCATGGGTGTGATGCATAGAGATCTTAAGCCAGAGAATTTCTTGTTGTCCAGTAAGGATGACAAGGCACTTCTCAAGGCCACAGATTTCGGCCTCTCGGTATTCATTGATGAAGGAAAGGTGTATCGCGATATAGTTGGGAGCGCTTATTATGTAGCCCCGGAAGTTCTACGTCGTAGATACGGAAAGGAAATAGATGTATGGAGTGCAGGAGTTATATTATATATCTTACTCAGTGGTGTGCCTCCATTCTGGGCAGAGACCGAAAAGGGAATATTTGATGCCATATTGGAAGGCCATATTGATTTCGAAAGCGCCCCGTGGCCAAGTATATCGAATAGTGCTAAGGACCTCGTTCGTAAGATGCTTACACAGGACCCGAAGAAACGCATCACTTCTGCTCAGGTTCTTGAGCACCCATGGATTAGAGAAGGTGGAAATGCTTCTGACAAGCCAATAGACAGTGCAGTCCTTTCCAGAATGAAGCAATTTAGAGCAATGAATAAACTAAAGAAACTTGCACTCAAGGTCATAGCTGAAAATCTTTCTGAAGAAGAGATCCAAGGTTTAAAGGCAATGTTTACAAATATCGACACTGACAACAGCGGTTCAATCACATATGAGGAACTAAGGGCCGGATTGCAACGACTTGGATCGAAACTCACTGAAGCCGAAGTTCGGCAGCTGATGGATGCTGCTGATGTAGATGGAAACGGAAGTATCGACTACATCGAATTCATCACTGCTACAATGCATAGACATAGGTTAGAAAGAGATGAGCATCTTTACAAGGCCTTCCAGTATTTTGATAAAGACAACAGCGGGTTTATCACAAGAGATGAACTAGAATCAGCCATGAAGGAATATGGTATGGGTGATGAAGCCACAATCAGGGAAATCATATCAGAAGTTGATACAGATAATGTAAGCCTATTTTCTTTAACCTTAACCCTAACCAAGCATTTTTCCCACTAG | 1170 | 0.4222 | MQHLSGQPNIVEFKGAYEDKHSVHVVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKDDKALLKATDFGLSVFIDEGKVYRDIVGSAYYVAPEVLRRRYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILEGHIDFESAPWPSISNSAKDLVRKMLTQDPKKRITSAQVLEHPWIREGGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIQGLKAMFTNIDTDNSGSITYEELRAGLQRLGSKLTEAEVRQLMDAADVDGNGSIDYIEFITATMHRHRLERDEHLYKAFQYFDKDNSGFITRDELESAMKEYGMGDEATIREIISEVDTDNVSLFSLTLTLTKHFSH | 389 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc271870g00026 | 389 | CDD | STKc_CAMK | 1 | 206 | - | - | |
Stsc271870g00026 | 389 | ProSitePatterns | EF-hand calcium-binding domain. | 263 | 275 | IPR018247 | - | |
Stsc271870g00026 | 389 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 34 | - | - | |
Stsc271870g00026 | 389 | Coils | Coil | 272 | 292 | - | - | |
Stsc271870g00026 | 389 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 250 | 285 | IPR002048 | GO:0005509 | |
Stsc271870g00026 | 389 | FunFam | calcium-dependent protein kinase 1 | 35 | 214 | - | - | |
Stsc271870g00026 | 389 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 322 | 357 | IPR002048 | GO:0005509 | |
Stsc271870g00026 | 389 | Gene3D | - | 215 | 380 | - | - | |
Stsc271870g00026 | 389 | Pfam | Protein kinase domain | 1 | 207 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc271870g00026 | 389 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 1 | 373 | - | - | |
Stsc271870g00026 | 389 | ProSitePatterns | EF-hand calcium-binding domain. | 299 | 311 | IPR018247 | - | |
Stsc271870g00026 | 389 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 69 | 81 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc271870g00026 | 389 | FunFam | Calcium-dependent protein kinase 1 | 215 | 379 | - | - | |
Stsc271870g00026 | 389 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 286 | 321 | IPR002048 | GO:0005509 | |
Stsc271870g00026 | 389 | CDD | EFh | 329 | 373 | IPR002048 | GO:0005509 | |
Stsc271870g00026 | 389 | Pfam | EF-hand domain pair | 255 | 315 | IPR002048 | GO:0005509 | |
Stsc271870g00026 | 389 | Pfam | EF-hand domain pair | 325 | 374 | IPR002048 | GO:0005509 | |
Stsc271870g00026 | 389 | SUPERFAMILY | EF-hand | 246 | 373 | IPR011992 | - | |
Stsc271870g00026 | 389 | ProSiteProfiles | Protein kinase domain profile. | 1 | 207 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc271870g00026 | 389 | ProSitePatterns | EF-hand calcium-binding domain. | 335 | 347 | IPR018247 | - | |
Stsc271870g00026 | 389 | SMART | serkin_6 | 1 | 207 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc271870g00026 | 389 | CDD | EFh | 255 | 314 | IPR002048 | GO:0005509 | |
Stsc271870g00026 | 389 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 221 | IPR011009 | - | |
Stsc271870g00026 | 389 | Gene3D | Transferase(Phosphotransferase) domain 1 | 35 | 214 | - | - | |
Stsc271870g00026 | 389 | SMART | efh_1 | 290 | 318 | IPR002048 | GO:0005509 | |
Stsc271870g00026 | 389 | SMART | efh_1 | 326 | 354 | IPR002048 | GO:0005509 | |
Stsc271870g00026 | 389 | SMART | efh_1 | 254 | 282 | IPR002048 | GO:0005509 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc271870g00026 | Stsc-Chr271870 | 140553 | 143691 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc271870g00026 | 1 | 373 | EF-hand Containing Proteins | AT3G20410 | 86.595 | 0.0 | 697 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Stsc271870g00026 | Pkinase | 2.2e-59 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc271870g00026 | K13412 | - | gmx:100794852 | 695.271 |