Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271869g00038 ATGAGGAATACTATTAAGGATGAGAAGATTGGTGGCAAGTTGGATCCTTCTGATAAGCAGAAGATTGAGAAGGCTGTTGATGATGCTATTGAGTGGGTTGAAGGGAATCAGTTGGCTGAGGTGGATGAATTTGAAGACAAGTTGAAGGAGTTGGAAGGTTTGTGTAATCCAATTATTGCTAAGATGTATCAAGGTGGTGGTGGTGATGTGCCTATGGGAGGTGGTGCAGATGGTGCATCTTATGGAAATGCTTCATCTGGTGGCAACAATGGTGCTGGTCCTAAGATTGAAGAAAGAAATGTTGTGCTGAGGAAGAATAACAAGTCTGAGTGA 333 0.4264 MRNTIKDEKIGGKLDPSDKQKIEKAVDDAIEWVEGNQLAEVDEFEDKLKELEGLCNPIIAKMYQGGGGDVPMGGGADGASYGNASSGGNNGAGPKIEERNVVLRKNNKSE 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271869g00038 110 MobiDBLite consensus disorder prediction 73 110 - -
Stsc271869g00038 110 FunFam Heat shock protein 70 1 65 - -
Stsc271869g00038 110 Gene3D - 1 99 IPR029048 -
Stsc271869g00038 110 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 1 68 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271869g00038 Stsc-Chr271869 184842 185264 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271869g00038 1 98 Calmodulin-binding Proteins AT1G16030 67.347 1.39e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271869g00038 K03283 - twl:120010850 140.969