Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271869g00031 ATGGATCAAGAAACAAAGTTGTATATTGCCACTGATGGAAGGTCAAGGCTGCAGCCTCCTCTTCCTCCGGGCTACTTTGGCAATGTTATATTCACAACAACACCGATCGCTATCGCCGGGGATCTCATGTCAAAGCCGATATGGTACACTGCTAGCAGAATCCACAATGCTCTGTCAAGGATGGACAATGATTATTTGAGGTCTGCTCTTGATTACTTGGAGCTGCAGCCGGATCTTAAGGCCTTGGTTCGCGGCGCTCACACTTTCAAGTGTCCAAATCTAGGCATCACTAGCTGGGTTAGGCTTCCAATTCATGATGCTGATTTTGGTTGGGGAAGGCCTATTTTCATGGGGCCTGGAGGGATTGCTTATGAAGGATTGTCTTTCATAATTCCGAGTTCAACGAATTGTGGGAGCTTGTCTGTGGCAATTGCTCTTCAGCCTGATCACATGAAGGTGTTCAAGGAATTGATCTATGACATTTGA 486 0.463 MDQETKLYIATDGRSRLQPPLPPGYFGNVIFTTTPIAIAGDLMSKPIWYTASRIHNALSRMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNCGSLSVAIALQPDHMKVFKELIYDI 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271869g00031 161 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 157 - -
Stsc271869g00031 161 FunFam Tryptamine hydroxycinnamoyl transferase 1 159 - -
Stsc271869g00031 161 Gene3D - 1 161 IPR023213 -
Stsc271869g00031 161 Pfam Transferase family 2 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271869g00031 Stsc-Chr271869 144490 144975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271869g00031 2 161 Monolignol Biosynthesis Gene Families AT5G48930 79.375 8.66e-94 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271869g00031 K13065 - gmx:100820075 314.694