Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271869g00022 ATGGGGATATATCTGAGTGCGCCGAAAACAGAGAAGGCATCTGAAGATGGTGAGAACGACAAGCTTCGTTATGGACTTTCTTCGATGCAGGGTTGGCGTGCTTCCATGGAAGATGCTCATGCAGCTTATCCAGATTTGGATGATTCTACTTCTTTCTTTGGTGTTTATGATGGGCATGGAGGCAAAGCAGTTTCCAAATTCTGTGCCAAGTATCTACATCAACAGATGCTTAAGCATGAAGCTTACTTAGCTGGAGATATAGGCACATCTTTACAGAAAACTTTCCTTAGAATGGATGAGATGATGCGCGGACAAAGAGGGTGGAGAGAATTGGCAGTCTTGGGAGATAAAATAGAAAAGTTGTCTGGTATGCTAGAGGGATTTATATGGTCGCCCAGGAGTGGTGGTGAAACCCATGACCGTCCCGATGATTGGGCTTTTGAGGAGGGACCACATTCTGATTTCACTGGACCAAACTCTGGAAGTACAGCTTGTGTGGCTGTCATTCGAGGAAAAAAACTTGTCGTTGCCAATGCTGGTGACTCTAGATGTGTATTATCAAGGAAGGGCCAGGCACACAATTTGTCTAAGGATCACAAGCCTGAGCTTGAGGCTGAGAGAGACAGGATTATAAATGCTGGTGGTTTCATCCAAGTTGGACGTGTCAATGGAAGTTTAAACTTGGCTAGAGCAATTGGAGACATAGAATTCAAGCAGAACAAGGGTTTGCCTGCTGAGAAACAAATTGTGAGTGCTGAGCCAGACATAACTTCCGTTGAGCTTTGTGACGACGATGAGTTCCTTGTAATAGCTTGTGATGGGATATGGGATTGCATGTCAAGCCAACAACTTGTGGACTTCATACATGCTAAGTTAAAGGAGGAGAACAAACTATCTGTGGTGTGCGAGATGGTATTCGATAGGTGCTTGGCACCCACAGCTGGTGGGGAGGGATGTGATAACATGACCATGATCTTGGTTCAGTTCAAAACTCCTTTGAATCCAAGTGCTTCTAATACGGAGGACAAGCCTCAGTCGTCTGCTGAACCGGCCGAAGCTGATAAAAGTTCAGAGCAAACAGAACAAAAGTGA 1092 0.4505 MGIYLSAPKTEKASEDGENDKLRYGLSSMQGWRASMEDAHAAYPDLDDSTSFFGVYDGHGGKAVSKFCAKYLHQQMLKHEAYLAGDIGTSLQKTFLRMDEMMRGQRGWRELAVLGDKIEKLSGMLEGFIWSPRSGGETHDRPDDWAFEEGPHSDFTGPNSGSTACVAVIRGKKLVVANAGDSRCVLSRKGQAHNLSKDHKPELEAERDRIINAGGFIQVGRVNGSLNLARAIGDIEFKQNKGLPAEKQIVSAEPDITSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHAKLKEENKLSVVCEMVFDRCLAPTAGGEGCDNMTMILVQFKTPLNPSASNTEDKPQSSAEPAEADKSSEQTEQK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271869g00022 363 MobiDBLite consensus disorder prediction 333 363 - -
Stsc271869g00022 363 PANTHER PROTEIN PHOSPHATASE 2C 17 328 IPR015655 GO:0004722|GO:0006470
Stsc271869g00022 363 MobiDBLite consensus disorder prediction 333 353 - -
Stsc271869g00022 363 Pfam Protein phosphatase 2C 156 314 IPR001932 -
Stsc271869g00022 363 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Stsc271869g00022 363 CDD PP2Cc 23 329 IPR001932 -
Stsc271869g00022 363 Gene3D - 1 330 IPR036457 -
Stsc271869g00022 363 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Stsc271869g00022 363 SMART PP2C_4 13 327 IPR001932 -
Stsc271869g00022 363 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Stsc271869g00022 363 SUPERFAMILY PP2C-like 3 330 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271869g00022 Stsc-Chr271869 95724 102074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271869g00022 1 342 PP2C-type Phosphatase Gene Family AT2G25070 75.219 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271869g00022 K17499 - gmx:100776787 646.351