Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271869g00018 ATGAAGATGGAGATGGCCACTTACTATTCACTCTCTGCAGCAGTGCTGCTTCTTGTGATTTCAGGCACCACCACTACTCTGGTCACAGCCACAGACCACATTGTTGGTGCAAACCGTGGCTGGAACCCTGGCATCAATTACACTCTTTGGGCCAATAACAACACTTTCTATGTTGGTGACCTCATATCATTTAGGTACCAGAAGACACAGTACAATGTGTTTGAAGTGAACCAAACCGGTTATGACAACTGCACTATAGATAGTGCTGTTGGGAATTGGAGCAGTGGCAAGGACTTCATACCCTTAAATAAGGCCAAGAGATACTACTTCATCTGTGGCAATGGCCAATGTTTCAATGGCATGAAGGTTTCTGTTGTTGTTCATCATCTTCCTTCTCCTCCTAAGGCCGCGGTTGCGGCCGAACATTCGCCGACAAAGTCAGCTTCTCCTCCTTCTGTGCTCTTGGACTGGGGACTCTGCTCTTTAATGGTGTCTATTGTTTTAGTTCGGTTTGAATTGAATTGGATTTAG 531 0.4557 MKMEMATYYSLSAAVLLLVISGTTTTLVTATDHIVGANRGWNPGINYTLWANNNTFYVGDLISFRYQKTQYNVFEVNQTGYDNCTIDSAVGNWSSGKDFIPLNKAKRYYFICGNGQCFNGMKVSVVVHHLPSPPKAAVAAEHSPTKSASPPSVLLDWGLCSLMVSIVLVRFELNWI 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271869g00018 176 FunFam Lamin-like protein 29 130 - -
Stsc271869g00018 176 CDD Phytocyanin_like_1 32 127 - -
Stsc271869g00018 176 ProSiteProfiles Phytocyanin domain profile. 31 129 IPR003245 GO:0009055
Stsc271869g00018 176 PANTHER BLUE COPPER PROTEIN 28 139 IPR039391 GO:0009055
Stsc271869g00018 176 Pfam Plastocyanin-like domain 41 121 IPR003245 GO:0009055
Stsc271869g00018 176 Gene3D - 29 131 IPR008972 -
Stsc271869g00018 176 SUPERFAMILY Cupredoxins 30 128 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271869g00018 Stsc-Chr271869 82112 83131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271869g00018 5 175 Phytocyanin Superfamily AT5G15350 39.884 6.56e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271869g00018 - - adu:107463738 286.189