LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc271869g00013	ATGACAAAAGTTATGATGTCAAATTCTTCCAAAACTGGTAACCATGTTTCTGCTACAATGTGCAAATATGTTATATGGTCACCGGCAAATGGATTGGGAAACAGAATGATTAGCATTGCATCCACATTTCTGTATGCTGTTCTCACAGAAAGAGTTCTGTTAGTAAGATTTGAACCTGACATGCATGGCCTATTCTGTGAACCATTTCAAGAATCCACTTGGGTTTTGCCAATGGATTCACCTTTTTGGAAGAATGAGAATCTTGAGACATATGAAAGTGTGGTGTTAGCAAGAAACTTGACATTGGATGATCAGTTATCATTGCCTTCTGTTCTGTTTATTGATCTACAGTATAGACCAGAGGATCCTGAAAGATTTTTTCATTGTGGTCATAATCAAGAAGCTCTCAACAAAGTTGATGTCTTGATTATTCAGTCAGATCAGTACTTTGTGCCTTCTCTGTTTATGATTCAATCTTTTAGTCTTGATCTGAACAAGATGTTCCCGGAGAAGGATGCTGTTTTCCACCACGTCGGACGGTACCTTTTCCACCCTTCGAACGAGGCGTGGGGACAAATTACCAGATTCTATGACGCATACTTGGCGAAAGCTAACGAGAGGATTGGCCTTCAGGTAAGAGTGTTTAACCCCGCTTCCACTCCGCAACAAGCAGTTATGAACTTACTTTTAAGCTGTGCCATTGAGAACAAGATACTTCCAGAAATCGATACGCGAAATCCGGTTTCAAATGCGAAAAATACCAACCACACTCTAAAGGCTGTTCTTGTGACATCTTTATATCCAGAGTATGCTGAAAATTTGAGAACCATGTACCTTAGAGGAGCAACTATCACAGGAGAAGTAATAGGAGTTTATCAACCAAGTCATGAACAAGAGCAAAAGTTTAATGACAATGTTCACAACATAAAAGCATTGGTGGATATGTATCTACTAAGTTTATGTGATGTGTTGGTGACTACTTCTGTGTCTACTTTTGGTTATGTGGCTCATGGATTTAGGGGTTTGAAGCCTTGGTTACTTTATAGGCTAACAAGTGATGAGACACATTCTCCAGCTTGTGTTAGAGACTTGTCACCTGAGCCTTGTTACCATTTTGCCCCTCAGCATCAATGTAATGGTTTGAAGCCTGAACAACATTTTGGTACTTCTTTCCCACATATCTTTGAATGCAAGGATTTTAATCGTGGAGTGAAGCTTGTTGATGGTGTTTAG	1233	0.3958	MTKVMMSNSSKTGNHVSATMCKYVIWSPANGLGNRMISIASTFLYAVLTERVLLVRFEPDMHGLFCEPFQESTWVLPMDSPFWKNENLETYESVVLARNLTLDDQLSLPSVLFIDLQYRPEDPERFFHCGHNQEALNKVDVLIIQSDQYFVPSLFMIQSFSLDLNKMFPEKDAVFHHVGRYLFHPSNEAWGQITRFYDAYLAKANERIGLQVRVFNPASTPQQAVMNLLLSCAIENKILPEIDTRNPVSNAKNTNHTLKAVLVTSLYPEYAENLRTMYLRGATITGEVIGVYQPSHEQEQKFNDNVHNIKALVDMYLLSLCDVLVTTSVSTFGYVAHGFRGLKPWLLYRLTSDETHSPACVRDLSPEPCYHFAPQHQCNGLKPEQHFGTSFPHIFECKDFNRGVKLVDGV	410

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc271869g00013	410	PANTHER	FUCOSYLTRANSFERASE 2-RELATED	13	408	IPR004938	GO:0008107\|GO:0016020\|GO:0042546
	Stsc271869g00013	410	Gene3D	-	191	349	-	-
	Stsc271869g00013	410	Pfam	Xyloglucan fucosyltransferase	11	378	IPR004938	GO:0008107\|GO:0016020\|GO:0042546
	Stsc271869g00013	410	Gene3D	-	18	72	-	-
	Stsc271869g00013	410	FunFam	Galactoside 2-alpha-L-fucosyltransferase	19	70	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc271869g00013	Stsc-Chr271869	50200	51789	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc271869g00013	21	407	Xyloglucan Fucosyltransferase1	AT2G03220	49.105	2.35e-123	367