Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271869g00011 ATGGACAAGTTGGGATTGAGTTCCAAGAGATTCACAACATTCTTTGTGGTGATCTTCATATCTTTACCTATTGCTATACTTGTTACCTCAATTTGCAGAAAACCAAGCTTTGCTATCTTTGAGGCCAATAAGGAACTTCACAATGTCAACAACACTATGTCACAGGTAGTGAAAGGGAACATCCAAAATGGTACAACTATTGAAGGAAGAGCTGCAGAAACAGGGTCAAGAAGTGCTTCCTCCATTGAAAGTTCAACATATGATGACACTGAGAATGTTGATGACAAGCTTTTTGATGGACTTATAGCATCTGGTTTTGATGAAGCATCATGCATAAGCAAGCTTGAGTCTCATCGTTACCGGCGCAAAGCTTCTCCTTCTCACAAGCCTTCTCCATTTCTGATATCCAAACTAAGAAACTATGAAAAGATTCATAGAAAGTGTGGACCTCATAGTAGAGCTTACAACAAAAGCATGGCCAAGATTGTAAATTCCAAGAACCATGGTGATTCAAAGTGCAAATACATTGTATGGACACCTTCAAATGGCTTAGGGAACCAAATGATAAGCATGGTAGCAACATTTCTCTATGCTCTTCTGACAGATAGAGTTCTTCTTGTAAGATTTGGGAGTGACATGGATGACCTATTTTGTGAGCCATTTCTCAATTCAACTTGGTTATTGCCTAAGGACTCTCCATTTTGGTATGAAAACAATGGTGAAACATATCAAACATTGCTAGAGAGGGATAAGGCTAATAACAATTCAAAGGAGGATTTTGATTTACCTTCTGTTCTGTTTATCAATCTACAGCACACAAGCAATGATCCTGAGAAATTTTTTCACTGTGACCATAGTCAAGATCTTCTCAGAAAGGTTCCTCTGTTGGTCCTTCAATCAGATCAATATTTCGTCCCTTCATTGTTCATAACCCCATCTTTCAACCTCAAGATCACCAACATGTTCCCGGAAAAGGACACCGTTTTCCACCATTTGGCGCGGTACCTTTTCCACCCTTCGAACGAGGCGTGGGGACTAATCAGCAGATTCTACGACGCATACTTGGCGAAAGCCGATGAAAAAATCGGAATCCAGGTCAGAGTTTTTAGCCCTTCCACCACTCCACACCAAGCAATAATGGACCTACTCTTGAGCTGCACAATAAGCAACAAGGTACTTCCACAAACAGTTGGTGTGCACAACTCATCAATGGCATATTCTACCACTACTTATACAAGAAAAAACCATACCCTAAAAGCAGTTATTGTAGCATCATTACATCCATATTATGCTGATAATTTAAGGGCAATGTACCTTAAGAACCCAACAATCAATGGTGAAGTTGTGGGAGTGTATCAACCTAGTCATGAGGAACAACAAAAGTTTAAGGATAACATGCAAAACATGAAGGCATGGAGTGAAATGTATCTACTAAGTTTAAGTGATGTGTTGGTAACTACTTCATTATCTACATTTGGGTATGTGGCTCAAGGATTAGGGGGATTGAAGCCATGGCAACTTTTCAAGCTAGTTAGTAATGGCACATATTTTCCACCTTGTGTAAGGGATTTCTCAATGGAGCCTTGTTTGCATGTTCCTCCAAAGCATCATTGCAATGGAACCCTAATTCAAGATTTTCTCTCTTCTTTCCATCATGTTGGAAAATGCAAGGATTATCCTCATGGGGTCAAGTTGTTTAATGCTAATTTTAATTAG 1716 0.3945 MDKLGLSSKRFTTFFVVIFISLPIAILVTSICRKPSFAIFEANKELHNVNNTMSQVVKGNIQNGTTIEGRAAETGSRSASSIESSTYDDTENVDDKLFDGLIASGFDEASCISKLESHRYRRKASPSHKPSPFLISKLRNYEKIHRKCGPHSRAYNKSMAKIVNSKNHGDSKCKYIVWTPSNGLGNQMISMVATFLYALLTDRVLLVRFGSDMDDLFCEPFLNSTWLLPKDSPFWYENNGETYQTLLERDKANNNSKEDFDLPSVLFINLQHTSNDPEKFFHCDHSQDLLRKVPLLVLQSDQYFVPSLFITPSFNLKITNMFPEKDTVFHHLARYLFHPSNEAWGLISRFYDAYLAKADEKIGIQVRVFSPSTTPHQAIMDLLLSCTISNKVLPQTVGVHNSSMAYSTTTYTRKNHTLKAVIVASLHPYYADNLRAMYLKNPTINGEVVGVYQPSHEEQQKFKDNMQNMKAWSEMYLLSLSDVLVTTSLSTFGYVAQGLGGLKPWQLFKLVSNGTYFPPCVRDFSMEPCLHVPPKHHCNGTLIQDFLSSFHHVGKCKDYPHGVKLFNANFN 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271869g00011 571 FunFam Galactoside 2-alpha-L-fucosyltransferase 171 222 - -
Stsc271869g00011 571 Pfam Xyloglucan fucosyltransferase 90 538 IPR004938 GO:0008107|GO:0016020|GO:0042546
Stsc271869g00011 571 Gene3D - 170 225 - -
Stsc271869g00011 571 PANTHER FUCOSYLTRANSFERASE 2-RELATED 16 567 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271869g00011 Stsc-Chr271869 39019 41088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271869g00011 75 565 Xyloglucan Fucosyltransferase1 AT2G03220 47.465 7.16e-157 459