Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271869g00010 ATGTCATTCTCAGAAAGACCGAGTTTGATGGAGAGGCTAAGATCAATCTTCAGCAGCGGTGGCGGCCGCGCAAAGAACAATCCTTCGAGATCCTTTAGGCTAGGAGTGAAGAAAGGATCAGCAGGACTCAGAACATTTGGAAGATCACTCAAAACTGGTGTAACTACTTGGGCAGTGTTCCCTGAAGATCTCAAAGTTTCAGAGAAGAAAGTGTTTGATCCTCAGGACAAGACCCTTCTCTATTGGAACAAGTTCTTTGAGATCCTCTGCATTTTTTCAGTAGCCGTTGACCCTTTCTTCTTCTATCTCCCTTACTTCAACCTCAAGTCTTATTGCCTCGCCATAGATAGCACCTTGGCTAATTTTACAGCTGCACTGAGGACCATATTGGATTTCATCTATCTCCTGCGCATAAGCTTTCAGTTTCGAACTGCTTATATCGCGCCTTCATCTCGTGTGTTCGGGCGAGGTGAACTCGTCATAGATCCTGCAAAGATCGCCAGCAGATATCTAAGTCGATATTGCATTGTTGACTTCATGTCTGTGCTTCCTGTGCCACAGGTTTGA 567 0.4515 MSFSERPSLMERLRSIFSSGGGRAKNNPSRSFRLGVKKGSAGLRTFGRSLKTGVTTWAVFPEDLKVSEKKVFDPQDKTLLYWNKFFEILCIFSVAVDPFFFYLPYFNLKSYCLAIDSTLANFTAALRTILDFIYLLRISFQFRTAYIAPSSRVFGRGELVIDPAKIASRYLSRYCIVDFMSVLPVPQV 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271869g00010 188 SUPERFAMILY Voltage-gated potassium channels 73 187 - -
Stsc271869g00010 188 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 63 188 - -
Stsc271869g00010 188 Pfam Ion transport protein 81 187 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271869g00010 Stsc-Chr271869 35564 36130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271869g00010 23 188 Ion Channels AT5G57940 65.060 3.30e-67 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271869g00010 K05391 - adu:127741462 341.273