Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271869g00005 ATGGTAGGAGGAGGAGGAGTGAAGGTGAGAGAATATGATGAAGAGAGACACAAAATGGAAGTTGAGAAGCTTGAGAAGCTTTGTGAAGTTGGAAGCAATAATAATAAACCTTCTCTTCTCACTGACCTCATGGGTGACCCCATTTGCCGTATCCGTCACTTTCACTTACATCAAATGCTGGTTGCTGAATATGGAGAAGGAGGAGAAGTAGTTGGAGTTATTAGAGGGTGTGTGAAAACAGTTACAAAGGGAAATAATTCATCACTTTATATCAAGGTGGCTTATATCTTAGGACTCAGAGTCTCTCCTCTACACAGGAGATATGGCATTGGCACAAAGTTAGTTGAACATTTAGAAGAGTGGTGCAAGCAAAAGGGTGCTAACTATGCATATATGGCAACTGATTGCACTAATGAGCCTTCACTCAATTTGTTCACAAAAAAATGTGGATACTCAAAATTTAGGACTCTAACCATGTTAGTGCAACCTGTTCATGCTCACTACAAGCCTATAAGCTCCAACGTGGTCATGTTTCGCCTTCCGCCGTGCCTGGCTGGGACAATGTACAACTACATCTTTGCGAATTCGGAGTTTTACCCTAAGGATATAGATTTAATTTTGTCGAACAAACTCAATTTGGGAACTTTCGTAGCGATACCAAAGAAGAATATCGGAAGATTCGATCCGAAAATGGGTATTTTGCCTCCAAGCTATGCTATACTAAGTGTTTGGAACACCAAAGAAGTGTTCAAATTGCAATTGAAGGGTGTGTCACCATTAGCACATGCTTGTTGTGTAGGTACAAGGTTGTTAGATGAATGGATGCCATGGCTAAGGTTACCTTCATTCCCTAATGTTTTTAAGCCATTTGGGGTTTATTGTCTTTTTGGTCTACACATGGAGGGAAAATATGGTAGAAACCTCATGAAGGGTCTATGTGGACTTGTTCACAATATGGCTAGAGATGATGGTGGTTGTGGGGCCATTGTGGCTGAGTTGGGCCTAAGGGACCCAGTTAGAGAGGCTGTCCCACATTGGGCCAAGTTCTCATGGGCTGAAGACATGTGGTGCATCAAGAATCTTGAGAAGAAATCTGAGCCGTCGGATTGGTTGACTTCTAAACCCTCTTCTCCGGTTATTTTTGTTGACCCAAGAGATTTTTGA 1164 0.4201 MVGGGGVKVREYDEERHKMEVEKLEKLCEVGSNNNKPSLLTDLMGDPICRIRHFHLHQMLVAEYGEGGEVVGVIRGCVKTVTKGNNSSLYIKVAYILGLRVSPLHRRYGIGTKLVEHLEEWCKQKGANYAYMATDCTNEPSLNLFTKKCGYSKFRTLTMLVQPVHAHYKPISSNVVMFRLPPCLAGTMYNYIFANSEFYPKDIDLILSNKLNLGTFVAIPKKNIGRFDPKMGILPPSYAILSVWNTKEVFKLQLKGVSPLAHACCVGTRLLDEWMPWLRLPSFPNVFKPFGVYCLFGLHMEGKYGRNLMKGLCGLVHNMARDDGGCGAIVAELGLRDPVREAVPHWAKFSWAEDMWCIKNLEKKSEPSDWLTSKPSSPVIFVDPRDF 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271869g00005 387 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 7 182 IPR000182 GO:0016747
Stsc271869g00005 387 Gene3D - 12 162 - -
Stsc271869g00005 387 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 7 157 IPR016181 -
Stsc271869g00005 387 CDD NAT_SF 59 131 - -
Stsc271869g00005 387 FunFam Putative N-acetyltransferase HLS1 22 156 - -
Stsc271869g00005 387 Pfam Acetyltransferase (GNAT) family 57 151 IPR000182 GO:0016747
Stsc271869g00005 387 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271869g00005 Stsc-Chr271869 13179 15826 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc271869g00005 Acetyltransf_1 2.7e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271869g00005 - - gmx:100802670 653.669