Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271867g00027 ATGGCTCTTTCTCGTACTCTCATAATAATCCTTGTTGCATTGTCTACCATCTTCTCATCAACCATAGCTGAAGATGAAGAATACATAGTTGGAGATTACTATGGTTGGAGAACATTCTTTGATTACCAAGCTTGGGCTGCAAACAAGAATTTCTATGTTGGGGACCGGATTGTGTTCAACTATCTTCCTGGATGGGACAACGTGGTGAAGGTGACTCCAGAAGACTTCATAACGTGCACAGTTTCTCCAGATGCAATAACATTGAAAAGTGGACATGATGAGATTAGATTGGAAGACACAGGGGCAAGATGGTACATTTCAAGCGTTAGCGATCACTGTAAATTAGGACAAAAGCTTGCAATATATGTTCGGCCAGCAAGGTCTCCACCTGCACCTGCACCAGCATGGACTCCTATAACACCTTCTGCCGAGCCTCCTTATTATTTTCCACCACAAGTGGGACCTACTCCAGCAGCATCTGCACCGTGGAGTCCTATAACACCTTCTGCTGAATCTCCTTATGCACCGCGTAAAGTACCTGCACCAACCACACATGCACCGATGAGTCCTATGACTCCTTCAGCTGAACCTTCTTATTATTATGTACCTACAGGGCCTCCTGCACCTGCACCTTACTCTCAATCTCATTCTGCTTCATGGACTAATGATTTCTCTGGCCGGTTTGCTCGATCCATGCCGAAGAAACCATTCAAAATATTTCATTAA 726 0.4449 MALSRTLIIILVALSTIFSSTIAEDEEYIVGDYYGWRTFFDYQAWAANKNFYVGDRIVFNYLPGWDNVVKVTPEDFITCTVSPDAITLKSGHDEIRLEDTGARWYISSVSDHCKLGQKLAIYVRPARSPPAPAPAWTPITPSAEPPYYFPPQVGPTPAASAPWSPITPSAESPYAPRKVPAPTTHAPMSPMTPSAEPSYYYVPTGPPAPAPYSQSHSASWTNDFSGRFARSMPKKPFKIFH 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271867g00027 241 ProSiteProfiles Phytocyanin domain profile. 26 125 IPR003245 GO:0009055
Stsc271867g00027 241 FunFam Cupredoxin superfamily protein 24 128 - -
Stsc271867g00027 241 Gene3D - 25 128 IPR008972 -
Stsc271867g00027 241 PANTHER BLUE COPPER PROTEIN 21 158 IPR039391 GO:0009055
Stsc271867g00027 241 SUPERFAMILY Cupredoxins 27 123 IPR008972 -
Stsc271867g00027 241 MobiDBLite consensus disorder prediction 159 190 - -
Stsc271867g00027 241 Pfam Plastocyanin-like domain 36 117 IPR003245 GO:0009055
Stsc271867g00027 241 CDD Phytocyanin 27 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271867g00027 Stsc-Chr271867 202159 203998 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271867g00027 8 187 Phytocyanin Superfamily AT5G53870 34.409 1.66e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271867g00027 - - aip:107647247 266.929