Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271867g00012 ATGCTGAATGCTGAACATTGTTGCAAGCTGAGGAGTTTTCCACCTACTATCAAACTGCCCTCGCTGGAAGAACTCATTCTATTTGGTTGCTCAAGCCTTGAGTATTTTCCAGAAATTCCGGAAGAGATGGAAAATCTACAAGTGCTTAATTTATATGACACAGGCATAAAAGATTTGCCATGTTCATTTTGTAATCTTTCTAGATTGCGGCATTTGAATATAGTGGGAGATGCAATGTGTAAGATACCAATTGTGATTGGCATGATGCCAAAACTAATGTTCTGTGATATTAAGGGCGGAGGCAATAAGGGGAGGGTATCAAGAGAGCAGATGGAAGGACTTCAAGGAATACTCACTACTCATTCTCACTCCCTCTACTCTTCAAATATGATTCGTCTCTGTCTAAGAAACAGCAATTTGTCAGATGAATTTTTTCCACTAGCTGTCACATGGTTTCCCAATGTGTTACTTTTAGACCTAAGTGGCAATAATTTTAGAATCCTTCCTGAATGCGTCCAAGAATTTCGCTGCCTACTTACCCTCAATGTGGATCATTGCAAGCATCTTCAGGAGATTAGAGGGATTCCACCACGCTTGACAAGCTTCTCAGCAGTAAACTGCAAATCACTTAGTCCCAGGGGCACAAGCGTATTACTCAACCAGAAAGTGCTGGAGGGTAGAAGTGCCGAGTTTGTGATGCCAGGTAGAAGGATTCCAAGGTGGTTTGAGAAGCGCCGCAGCGGAGCTTCCATTTCTTTCTGGTTTCGTGGCACCATATTCCCTCTCAATGCTCTTTGTGTTGCAATTCTACTTAAAGATGACATCCCTTCCCCAATGCAAGTAACACCTATCGCAACCATCAATGGCTACCAAGTTTCCAGTGGCAAAGAAATTCGAGTAGATCAATTTTTAATTTTGAATCTGAAGGGAAAATATTATGATAAGTCACTACCTTTTAATAAAATAGGATGGAATCATGTGGAAGTTTCTTATAAAGCATGTCGAGGTCCCAATTTCTACTACAAAGTGATTCCAATTGAGTCCATTGCAAAAGAGATTGGAATGCACGTAGTGAAGCAAAAGAGTAGTAGTGTGATTCAAGATATTCGATTCACAGATCCTTACAGAATGACACAACTAATTATAATGATGATGATGGTTTCAATAGTATTTCCCAACCATAAGAAGCAGCCCTTGCTCCTTGAAACACGCATTGGATTGTGGACTTTGCTGTTTTTTACAAACACACTTTAA 1254 0.4019 MLNAEHCCKLRSFPPTIKLPSLEELILFGCSSLEYFPEIPEEMENLQVLNLYDTGIKDLPCSFCNLSRLRHLNIVGDAMCKIPIVIGMMPKLMFCDIKGGGNKGRVSREQMEGLQGILTTHSHSLYSSNMIRLCLRNSNLSDEFFPLAVTWFPNVLLLDLSGNNFRILPECVQEFRCLLTLNVDHCKHLQEIRGIPPRLTSFSAVNCKSLSPRGTSVLLNQKVLEGRSAEFVMPGRRIPRWFEKRRSGASISFWFRGTIFPLNALCVAILLKDDIPSPMQVTPIATINGYQVSSGKEIRVDQFLILNLKGKYYDKSLPFNKIGWNHVEVSYKACRGPNFYYKVIPIESIAKEIGMHVVKQKSSSVIQDIRFTDPYRMTQLIIMMMMVSIVFPNHKKQPLLLETRIGLWTLLFFTNTL 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271867g00012 417 Gene3D Ribonuclease Inhibitor 1 115 IPR032675 -
Stsc271867g00012 417 Gene3D Ribonuclease Inhibitor 116 221 IPR032675 -
Stsc271867g00012 417 SUPERFAMILY L domain-like 2 212 - -
Stsc271867g00012 417 PANTHER LEUCINE-RICH REPEAT-CONTAINING 2 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271867g00012 Stsc-Chr271867 95794 97575 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271867g00012 1 221 WRKY Transcription Factor Family AT5G45050 30.396 3.67e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271867g00012 - - ahf:112751488 512.686