Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271866g00035 ATGTCTGATGATGGTGTTGGTGTTGTTGGTGCCAACATGAATGATCTTGGTGCTAGTTTACTCATAACTAGCAGCAAGTACAGGTACAGCAAGATTTGGCGCAGAACCAAATATGTTGGAATCCTCATCTTTCTCAAGAAATCAACACCACACACTTCATTGCCTCCTGCTAGATCCTCCTCTACCAAATCATACCTTGAAATTGACATAGCCTCTGATTCTGTTCAAGAGGAGAATGTAGAACATGATGACCCTCTGTGCTCACCACTTCCTCCTCAACACACTGAGGAGGGCCTTAATGGCAATAAGAACTGTAAGGTATTGCCAGGGCATGATGGAAGAAGCTTCTCCATGTGTTTGTTGGATTGCTGCAAACACAACAGTTACACAATTTTAGTGCTGCTATGCTCAGCTGCTTTGTCCTTCGCCACGGAATTCAAGCAGGAGGGGCCTAAATATGGTTGGCATGATGGTGTTGCCATACTATTTGCTGTTATTCTGATGGTTGCATTCCCTTCCATAACAAACTATTGGCGCGAAAGAAAGATGATGAAACTTTCAAAGAGACAGGAAGGCTTGTTGGAGAGGCGAATCGAGAAGCCAATCTCTTACATAGACAAATTTGTTCTTTTTGTCTCAGCATTAGTTGCTCTTGTGGCGCTCATTCGCGTCATCTGCAAGTCAAATGGGGACAGTAGTGGTGATTTGCCAGACCTCAAGGGAAATGTCTCAGTTGGTGTGGTGATGGAAGTCCTTAAGAGAACCTTGTTGAGGCCATATGGAAGGATTTCCATCTTAACAGGTCTTGTTACTGTTGTAGTGCTATGTGTGCAACATGGAATGCCACTTATGGTTACAGTTTCTCTCTATTATCAGAAGGTAGTGTCCAGAAAAGATGCAGTCCTCAATGATTTATCAGCTTGTACAACAATGGGGCTAGTTACTGTCATCTGCATTGATGTATCCGGCGGATTGGGATCCGAGCCGATGAAGGTTAGCAGAGTCTGGATGGGGGAGAAAGATATTAGCAAGGTTGAGGAATCAGAAATTGATCAAGTTGTTCTTGGTATGCTTCAACAAGGAGTTGTTTTATCTGTGGCACCAGAGCTTCAGCTTTCTCCAATATCAAGTTCACTTATTTCTTGGGCTGAAACAACTTGGGGAATAAATAGAGAGTCTTTCACAAAAGAATTTGACACTCTTGAGCACAGAAAACTGGATTCTGACAAAGAAGGCAGTGGAGTTTTGTTGAAAAATGTTGGTGAGAATGATCAAAATCTGCACTTGCACTGGAGTGGTGATGCATCCTTGGTATTGGATATGTGTTCACTATACTATGATTGCAAAGGGGAATGCCACACCATAGGGAAGAATAAGAAAATCAAATTTGAAGAAGTGATTAAGGAGATGGAAAATTGTGGTCTGAAGCCAATTGCATTTGCTCATAAACAAACTACTGTGCAAAAGCTTGAAAAAGATGGACTGATATTGTTAGGATTGATAGGTCTCAAACACACATGTCAAGAACACACAAAGCTAGCATTGGAAGAGCTCGGAGAAGCTGGAATAAGCATCGTATTGGTATCAGAGGATGCGATTGTGGTAGTGAAGGACATAGCTCAGGAACTAGGAATTGAACTGACAGCAAATGAAATTTTTCTTGAAGGAAAAGAACTTCAAGATTTGAATGTAAGTGGTAGATTGGATAAGGTGGACCTCGCCCGTATAATGGGAAGTTTTTGCCTTGAAGACAAGGTTCTCATGATAGAGTGCTTGCGAAAAAAGGGTCATGTGGTTGCATTTGTTGGAAAAAGGAATCCTAGCCATAGTTCAGTTCTGCAGGTAGCTGATGTGGGAATAATCCATGATTCTCTAGGCACAGTAGTGGACACAGATTGTTCTGGACTAACCATCAAATGTTTCAGTGCATTGAAACCAATTGTTATCGCCGGTAGAAGTAACTACAGAAACATTCAGAAGTTCATTCAAGTTCTACTCACCTTTAGCATATCAGGTTCACTCATAACCTTGATTACTACAATCTCCACAGGAGAATCACCCTTAACAGCATTCCAATTGATTTGGGTGAATTCTATAATGTGTCTTCTTGGTGGCCTAATGATGGTAATGGAGTTGAGTTGTGAGGAGAAGCTTCTTGCTGTTCAATCAACAAGTAGGAATCAATCAGTTATACCAAGAGAATTCTTGAAGAGCATAGCTGTTCAGGTTTTGTATCAGACTTTGGTATCAGCAATGCTCGAATTCATCGGCCATAGAACTAATGAAGAGAAGGAGGTTAGGAAAACCATGATTTTCAACTCATTCCTATTATGCCAGGTCTTCAATCTACTCAACACCATGAATTTGTTGAAAAAGCAAGTTGTCAAGGCTGTTCTGCAAAGCTACTTTTTCTTGGTGGCTTTAGCTTTTTGCATTCTTGTGCAGGTGCTGGTGATTGAGTATGCAAAATGCTTAGCATATTGCATGAGGCTGAATGTTCCACACTGGGCTATCTGTGTTCTAGTTGGTTTCTCTTCATGTGCATTTGAATGGAGCCTGAAGAATTTAGCAGTGATTCTTAGCACCAATAATGGTTCAGAAACAGCAAGTTCTTCACCCTCTGGGTTGTTTAATTGGTCACGTTGGTTTTATCTCCCTTTGGGATTTCCATTTCTGATGTTGCTTTTCTTCCCTCACCAAATGGACCAGATACTTAGATAG 2721 0.4127 MSDDGVGVVGANMNDLGASLLITSSKYRYSKIWRRTKYVGILIFLKKSTPHTSLPPARSSSTKSYLEIDIASDSVQEENVEHDDPLCSPLPPQHTEEGLNGNKNCKVLPGHDGRSFSMCLLDCCKHNSYTILVLLCSAALSFATEFKQEGPKYGWHDGVAILFAVILMVAFPSITNYWRERKMMKLSKRQEGLLERRIEKPISYIDKFVLFVSALVALVALIRVICKSNGDSSGDLPDLKGNVSVGVVMEVLKRTLLRPYGRISILTGLVTVVVLCVQHGMPLMVTVSLYYQKVVSRKDAVLNDLSACTTMGLVTVICIDVSGGLGSEPMKVSRVWMGEKDISKVEESEIDQVVLGMLQQGVVLSVAPELQLSPISSSLISWAETTWGINRESFTKEFDTLEHRKLDSDKEGSGVLLKNVGENDQNLHLHWSGDASLVLDMCSLYYDCKGECHTIGKNKKIKFEEVIKEMENCGLKPIAFAHKQTTVQKLEKDGLILLGLIGLKHTCQEHTKLALEELGEAGISIVLVSEDAIVVVKDIAQELGIELTANEIFLEGKELQDLNVSGRLDKVDLARIMGSFCLEDKVLMIECLRKKGHVVAFVGKRNPSHSSVLQVADVGIIHDSLGTVVDTDCSGLTIKCFSALKPIVIAGRSNYRNIQKFIQVLLTFSISGSLITLITTISTGESPLTAFQLIWVNSIMCLLGGLMMVMELSCEEKLLAVQSTSRNQSVIPREFLKSIAVQVLYQTLVSAMLEFIGHRTNEEKEVRKTMIFNSFLLCQVFNLLNTMNLLKKQVVKAVLQSYFFLVALAFCILVQVLVIEYAKCLAYCMRLNVPHWAICVLVGFSSCAFEWSLKNLAVILSTNNGSETASSSPSGLFNWSRWFYLPLGFPFLMLLFFPHQMDQILR 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271866g00035 906 Gene3D - 348 498 IPR023299 GO:0000166
Stsc271866g00035 906 Gene3D - 125 324 - -
Stsc271866g00035 906 SUPERFAMILY HAD-like 318 704 IPR036412 -
Stsc271866g00035 906 Gene3D - 499 640 IPR023214 -
Stsc271866g00035 906 Pfam Cation transporting ATPase, C-terminus 686 851 IPR006068 -
Stsc271866g00035 906 SUPERFAMILY Calcium ATPase, transmembrane domain M 111 856 IPR023298 -
Stsc271866g00035 906 Gene3D - 641 861 - -
Stsc271866g00035 906 PANTHER CATION TRANSPORTING ATPASE 111 190 - -
Stsc271866g00035 906 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 374 503 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271866g00035 Stsc-Chr271866 240280 243356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271866g00035 279 840 Primary Pumps ATPases AT3G63380 36.254 1.54e-104 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271866g00035 K01537 - gmx:102661547 696.427