Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271866g00029 ATGGAAGCAGGGAAGGAGGAGGCACTCAAAGCGATAGAGGTTGCTGAGAAGCGATTTGCTCAGAGAGACTTTGCAGGCGCGAAAAACTATGCCATAAAAGCCAAGACACTATGTCCTGGATTGGAGGGTATATCTCAAATGGTGACCACATTTGAGAACAAATGTGTGGGAGCTGATGGGGCGTTTAAGCTTGTTTCCGAGGCATGGACGTGGCTGTCAGATAGTGCTTTGCGCAGTACGTATGATCTCAAGAGAAATGGACAGTTGGGTGGGGTTACTCAGACAAATTTGTCTTCTGGCCACGCTACAGGTTATAGCAAATGTTCCAATTTGTCCTCTTCTCATGGTAGGCATGACACCTTTTGGACAATTTGCACCTCTTGTAAGGTTCAGTATGAGTATCTGCGCAAGTATGTGAACAAAAAACTTTCGTGTAAGAACTGTCGTGGCACTTTTGTTGCTGTTGAAACTGGGGCAGCCCCAGCAAATGGTTCATTTCCATATTGTCCTTGGTCCTATGTGCCCGGAAATGGGTATGGAAGTCATTCCTACGATGGAGTTGCTTATGTTCCAACCACTGCTGCCACCTATTTCAACGGCAATGGCGTTGCAGGATACCATTCTGGTCATGGATATGATTATGTTTCAAATGTTTCATTTCAGTGGGGCTCTTCTGGTCACGTGAATCAAAATGGACCAACTACCGTATCTACTGATTCTGTTTATCAAACCAATGGAAATGTGAAGAGAGGAAGACCAAAAATCAAATCAGTTGACAAGATGCATCGTGTGGCCGCCGAGACTGTGATCAACACACATTCAGATGTGTCGTTCGTTTATAATGAACAACAGGATCTTAAGATGAGTAGACCAGACAAGAAAAGGAAAGTAGTTGCAGCAGACGAAAAGGGGTCAAAATGCGCTTCTGAATCATTTTTGGCTAATGGTAATGAAAGCCTTGGGCAAGGCCTGAAGGTTTCCTGCGGAAGTGAAGTTCAAACCAAGCAGTGTTCCATGGCACCAGCTTTTGATGCGAGAAAATTATTGATTGAGAAGGCCAGGACAGAAATTAGAAAGAAACTGGAAGAGATGAAGTTGGCATCCGAAATTGCTGCAGCAGCAGCTGTCAGTGCGAGAGAGAAGTCTCAAGCTGAAAAGTCTCAAGCTGAAGATGGTCAAGTAAAAAGAGAGACATGTAGAAGAACAGTTCTGAATGCTTCTGGTCATCAAGTAGAGCGCAAGAAAATTGGTCCAGCCACTATAACTGTCCCAGATTCTGACTTCCATGACTTCGATAAAGATAGGTCAGAGGAATGCTTCAAGCCAAAGCAGATATGGGCCTTGTACGATGAGGAGGATGGAATGCCACGATTATATTGCCTGATCCGTGAAATTATCTCAGTTGATCCATTCAAGATTCACATTAGCTACTTAAGTTCCAAAACTGATAGTGAGTTTGGCTCAGTAAACTGGCTTGATTCTGGTTTTACTAAATCTTGCGGAAATTTCAGGGCATGGAATTCTGATGTCGTTGACCAAGTTAACATCTTCTCCCATCTTCTAAGTAAGGAGAAGGCTGGTCGAGGTGGTTGCGTTCGACTATATCCCAGAAGTGGAGACATTTGGGCCGTTTATCGAAATTGGTCACCAGACTGGAACAGATCTACTCCAGATGAAGTGAGGCATCAGTATGAAATGGTGGAAGTGCTGGACGATTACTCTGAGGAACTTGGTGTGTGCGTTTCGCCCCTTATCAAGCTGGCTGGATATAAGACAGTTTATCAAAGGAATACAGATAAAAGTGCCATCAGATGGATACCGAGGAGAGAAATGTTGCGCTTTTCACACCAAGTGCCTTCTTGGTTGCTCAAGGGGGAGGCAGAAAATTTGCCTGAAAGGTGTTGGGATCTTGATCCGGCTGCGACTCCGGATGACCTTCTTCATGCAGCAGCTGCAGAAGCAGAGGCTCTTTAG 1974 0.4473 MEAGKEEALKAIEVAEKRFAQRDFAGAKNYAIKAKTLCPGLEGISQMVTTFENKCVGADGAFKLVSEAWTWLSDSALRSTYDLKRNGQLGGVTQTNLSSGHATGYSKCSNLSSSHGRHDTFWTICTSCKVQYEYLRKYVNKKLSCKNCRGTFVAVETGAAPANGSFPYCPWSYVPGNGYGSHSYDGVAYVPTTAATYFNGNGVAGYHSGHGYDYVSNVSFQWGSSGHVNQNGPTTVSTDSVYQTNGNVKRGRPKIKSVDKMHRVAAETVINTHSDVSFVYNEQQDLKMSRPDKKRKVVAADEKGSKCASESFLANGNESLGQGLKVSCGSEVQTKQCSMAPAFDARKLLIEKARTEIRKKLEEMKLASEIAAAAAVSAREKSQAEKSQAEDGQVKRETCRRTVLNASGHQVERKKIGPATITVPDSDFHDFDKDRSEECFKPKQIWALYDEEDGMPRLYCLIREIISVDPFKIHISYLSSKTDSEFGSVNWLDSGFTKSCGNFRAWNSDVVDQVNIFSHLLSKEKAGRGGCVRLYPRSGDIWAVYRNWSPDWNRSTPDEVRHQYEMVEVLDDYSEELGVCVSPLIKLAGYKTVYQRNTDKSAIRWIPRREMLRFSHQVPSWLLKGEAENLPERCWDLDPAATPDDLLHAAAAEAEAL 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271866g00029 657 Coils Coil 350 370 - -
Stsc271866g00029 657 PANTHER BNAC03G44070D PROTEIN 1 52 - -
Stsc271866g00029 657 Pfam Domain of unknown function (DUF3444) 419 626 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271866g00029 Stsc-Chr271866 209261 211885 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271866g00029 5 258 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 26.087 1.78e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271866g00029 - - gmx:100788692 1067.76