Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271866g00012 ATGGAAGCTGAGCACGAACCATGCATTTGCCAGGGCTCCTGCAAGGTCTCCTGTGCCTGCAAGAGATCACAGAGGTTTTGTGTTAGTGACTGCCACTGCATGGCTGACACATGCACCAACCGAGGTGTGACACCGTCACCAGAAAGGCTAGCAAATCCTGTTCTAAGATGCTACTGCAAGTTACAATGGTGCCAAGCAAGGAACTGCCCCTGCTACAAAGCTGGGGTTTTTGGTACTGATCTTTGTTACTGCCCAGACTGGTGCAAAAATATCAGGAAAGATCCCCGACCGGATGCTTGTATCTGCGCAGGATCGTGTGATTTTAACTGCCATTGCCATAACTTGGATCATTTCTGTATCGAGGATTGTGCTTGTGACCCATTCAGCTGTCAAAATAGGGGAGTGATGGCACGGCCACCCATGGTTGACCCAACGGCACCGCGATGCAAGTGTCAGAAAAATCAGTGTTCCAACAATTCCTGTTCCTGCCGCAAATCGGGGAAAGTCTGCACCGCTTTTTGCACCTGCATGGGGTGTAACAACATTGGACAAGAACCCCAGCAAAATGTTCTTGATGAAGCCCAGAACAATGTTCAAGATGTAGCTGATGAAGATCTCTAA 621 0.4895 MEAEHEPCICQGSCKVSCACKRSQRFCVSDCHCMADTCTNRGVTPSPERLANPVLRCYCKLQWCQARNCPCYKAGVFGTDLCYCPDWCKNIRKDPRPDACICAGSCDFNCHCHNLDHFCIEDCACDPFSCQNRGVMARPPMVDPTAPRCKCQKNQCSNNSCSCRKSGKVCTAFCTCMGCNNIGQEPQQNVLDEAQNNVQDVADEDL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271866g00012 206 ProSiteProfiles CRC domain profile. 96 184 IPR005172 -
Stsc271866g00012 206 ProSiteProfiles CRC domain profile. 4 93 IPR005172 -
Stsc271866g00012 206 SMART CXC_2 148 184 IPR033467 -
Stsc271866g00012 206 SMART CXC_2 52 94 IPR033467 -
Stsc271866g00012 206 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 148 181 IPR005172 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Stsc271866g00012 TCR 1.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271866g00012 - K24331 aim:PYS61_01865 66.6254