Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271866g00011 ATGCTTGCTGATCCAAAAGAGGCAAGGGCTGGGGTAAGAGAGGTTCACTCCTTGCCATTCAATCCAGTTGACAAGAGAACAGCTTTGACTTACATTGATTCTGATGGAAATTGGCACAGGGCAAGCAAAGGTGCTCCTGAACAGATCATTGCCTTGTGTAACCTTAGGGAAGATGCTAAGAAAAAGTGCCATGCTATTATTGACAAGTTCGCAGATCCTGCAAATAGGAGTCTTGTTGATAGCTCCACACCCTTCGGTGAAGGTACTGCTTTGAATGGTTTGCATGTTCAGGATTAG 297 0.4478 MLADPKEARAGVREVHSLPFNPVDKRTALTYIDSDGNWHRASKGAPEQIIALCNLREDAKKKCHAIIDKFADPANRSLVDSSTPFGEGTALNGLHVQD 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271866g00011 98 PANTHER CALCIUM-TRANSPORTING ATPASE 1 79 - -
Stsc271866g00011 98 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 4 88 IPR023299 GO:0000166
Stsc271866g00011 98 Pfam Cation transport ATPase (P-type) 3 54 - -
Stsc271866g00011 98 Gene3D - 1 89 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271866g00011 Stsc-Chr271866 103928 105544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271866g00011 1 78 Primary Pumps ATPases AT2G24520 78.205 5.02e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271866g00011 K01535 - gmx:100816905 142.124