Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271866g00007 ATGGCACACAAGAGGATAAGAGAACGGCTTCGGAGAAGCGCTCTTTACACATTTGCATGTCTGGGAACACGAACAAGAGATGACGACCAACCCCACGCGCTACACGGCGCTGGATACACGCGCACCGTGCAATGCAACCAGCCACACCTTCACGAAAACAAACCCCCTTATTATTGCAAGAACCACATTTCCACAACCAAATATAACGCCATCACGTTTCTTCCAACCGCACTCTTTGAGCAATTCAGAAGGGTCGCTAATATATACTTTCTTTTAGCGGCACTTCTCTCTGTTTTCCCGATCTCGCCTTTTAGTCCGATAAGCATGATCGCTCCCTTGGCCTTCGTCGTCGGGCTTAGCATGGTAAAGGAAGCTTTGGAAGATTCTAGAAGGTTCCTTCAGGATCGCAAGGTTAATAATCGGAATGTAAGTCACCATGCTGGGAATGGCGTTTTTGAACCTAAGGCATGGAAGGATATTAGGGTTGGGGATGTTGTTAAGGTAGAAAAAGATGAATTCTTCCCAGCTGATTTACTTTTCTTGTCATCAAGCTACGAGGATGGGATTTGTTACGTTGAGACAATGAATTTAGATGGAGAGACTAATCTCAAGGTGAAAAGATCTCTTGAAGCTGCCTTGGGTCTTGATAGCGATGAAACTTTCAAGGATTTTACAGGAACAATTCAAGGCGAAGATCCGAATCCTAGTTTGTATACTTTCGTTGGGAACTTTGATTATGAACGCCAGGTTTATCCTCTTGACCCGAGTCAAATCTTGCTCCGTGATTCTAAGCTTAGAAACACTGATCATATCTATGGAGTTGTGATTTTCACTGGCCATGACACAAAAGTGATGCAGAATTCCACACATTCCCCTTCGAAAAGGAGCACAATCGAAAAAAAGATGGATCTAATCATATACATTCTCTTCGCTGTTCTTGTTATCATATCGGTTATGAGTTCCGTAGGGTTCATGGTAAAGACTAAGTACAAGGCTAAAAACTCACCTAAATTAACGGCCTCAAGGGCATTCAACAAATCAGACCCCTTGGAAAGTTTATTTTGCAATAAAATTCATGAACTCAAATTAGACTATAAGTAA 1101 0.4242 MAHKRIRERLRRSALYTFACLGTRTRDDDQPHALHGAGYTRTVQCNQPHLHENKPPYYCKNHISTTKYNAITFLPTALFEQFRRVANIYFLLAALLSVFPISPFSPISMIAPLAFVVGLSMVKEALEDSRRFLQDRKVNNRNVSHHAGNGVFEPKAWKDIRVGDVVKVEKDEFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRSLEAALGLDSDETFKDFTGTIQGEDPNPSLYTFVGNFDYERQVYPLDPSQILLRDSKLRNTDHIYGVVIFTGHDTKVMQNSTHSPSKRSTIEKKMDLIIYILFAVLVIISVMSSVGFMVKTKYKAKNSPKLTASRAFNKSDPLESLFCNKIHELKLDYK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271866g00007 366 Gene3D - 114 289 - -
Stsc271866g00007 366 SUPERFAMILY Calcium ATPase, transduction domain A 147 287 IPR008250 -
Stsc271866g00007 366 FunFam Phospholipid-transporting ATPase 119 289 - -
Stsc271866g00007 366 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 33 338 - -
Stsc271866g00007 366 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Stsc271866g00007 366 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 326 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271866g00007 Stsc-Chr271866 60862 61962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271866g00007 12 329 Primary Pumps ATPases AT3G13900 70.126 1.65e-159 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271866g00007 K01530 - gmx:100784621 504.212