Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271866g00005 ATGGCGGACAACACGGTGGCGAGGTTTATGTGCAGCTACGGCGGCGAGATCAGGCGCAACCACAGTAGTAACAACCCTCACTTCTCCTACTATGGTGGCAACAATAGGATGCTCCAAGTCGATCGCAACATAAGTTTCCACAACATGACAACCGAGCTCTCCGCCCTCTGCGGTGGGGGCGCCATTAACTACTTCAAGTATCTCATTCCCGGAGACGATCTTGACACTCTCATTACCGTCACCAACGACAGAGACCTCGGTTACATGATGAGGGAATTTGATCTGCACTTCCGCAGTTCTACCGACCGGATGAGAATTTTTCTCTTCCTAGACCCCGTCCATAACGGTGCGACCGCAGTAAATGCCTCCAACGAGGATCAGCGCGTTATCTTCATGGTGGTGGTCATGGTGGTGGCAGTAGTAGTTTTGATGTTGTTATTAATATTGATGCTGTTATTCTTGGTGGCGGTGGTGGTGATAACCCTGGTAGTAGTAGTAGTGGTGGTGGTGGTGGCAACAATGGAGGTGATGGTGGGATGGTGGTGGTTGTGGTGGCGTTGGCGTCGGGAAGATGGCGATGGTGGAATTGACGGAAGAGCTAAAGAAGAAGGAAGTGTTTAG 621 0.5105 MADNTVARFMCSYGGEIRRNHSSNNPHFSYYGGNNRMLQVDRNISFHNMTTELSALCGGGAINYFKYLIPGDDLDTLITVTNDRDLGYMMREFDLHFRSSTDRMRIFLFLDPVHNGATAVNASNEDQRVIFMVVVMVVAVVVLMLLLILMLLFLVAVVVITLVVVVVVVVVATMEVMVGWWWLWWRWRREDGDGGIDGRAKEEGSV 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271866g00005 206 Pfam PB1 domain 29 109 IPR000270 GO:0005515
Stsc271866g00005 206 PANTHER OS05G0427100 PROTEIN-RELATED 7 130 - -
Stsc271866g00005 206 SMART PB1_new 6 111 IPR000270 GO:0005515
Stsc271866g00005 206 SUPERFAMILY CAD & PB1 domains 28 112 - -
Stsc271866g00005 206 Gene3D - 29 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271866g00005 Stsc-Chr271866 38767 39469 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271866g00005 8 128 MAP Kinase Kinase Kinase AT5G57610 34.426 1.32e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271866g00005 - - ahf:112710177 115.161