Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271865g00042 ATGGAAGAAGTTAAAGTTAAAATCATTTCTAGAGAAGACATTAAGCCTTCATCTCCAACACCTTCTCACCTAAGAACCTATAAATACTCCATTTTGGATCAATTTTTCCCCATTAGTCATACTCCTATCATTTTCTTCTACGCCTCAAGCAATCCCTTTGATTTTCCCACGAGATTAAAATCACTTAAACAATCCTTATCTGAGATAATAACAAAACTCTACCCTTTTGGTGGCAGGATCAAAGATGATTTCTCCATTGATTGCAATGACGAAGGTGCTAATTTTGTAGTAGCAAAAGTGAATTGTAATATTGCAAAGTTTTTAAGCAACCCTGACTTGAATTCATTGGACAAGTTTCTTCCAGTTTCATTCTTCCATGAAATATCAATAGGAGATCATGTGACTAACATTCAAGTCAATGTCTTTGTGTGTGGCGGAATTGCCATTGGATTTTGCATTTCTCATAAGATCCTTGATGGTGGTACGCTTGGCATCTTCCTTAAGATGTGGACAGAAAGAATTGGCAGCGACCGCAATTTGAAACCCTTGACAGAACCGAATTTTACTACAAAATCTCTGTTTCCTACAAGTACTTTACGTCTTAGAGACTTATCAATGTTACGTCTTAGAGACTTATCAATGGAATCATGGGGTTCCTATTCGGAGGAAGGAAATTGGGTTACAAAGAGATTCTTGTTCACAAGTTCAGCTATTGACACCCTCAAGGCTCAAGTATTAGCGAATTCTTCATCCGATCCATCGAAGAACCATGCTTCACATGTCCAAATTGTTTCTGCATTTTTGTGGAAGTGTTTCATGACCGCGTCAAAGGTTCAATTTGGAATTCAAAGCCCTTCTATGATCACCCACGTAGTGAACCTTCGTCCAATAATAAAAAAATTTCTACACCAAGAGAATTCTATAGGGAACTTTCTTTGGATAACACCTATAGAACACTTGAGTGGGCATGAGCTGAATTTGAATGAGTTGGTGACTAAATTGAGGGACTCAATTCAACAAGTTGATAAGGATTTCGTTGCAAGATTGCAAAGTGAGGAGGAGGGAATTTCAATTATGGAAGGTGCTCTTACTAGGAATATGGGTGAGGCATTGGAAACCCTAGGTTTTACTAGTTGGTGTAAATCCGGGTTCTATGATGTTGATTTTGGATGGGGAAAACCTATATTCAAAGATGGTATAGAAGCTTGGGTTATCTTGGATGAGAAGAAAATGAATCTTTTGATGTCAAGCACTGAATTACTCACTTATGCAACTCTTGATCCAAGCCCTTTGGCAATGGCATCTAACTCAAGATTATAG 1320 0.3788 MEEVKVKIISREDIKPSSPTPSHLRTYKYSILDQFFPISHTPIIFFYASSNPFDFPTRLKSLKQSLSEIITKLYPFGGRIKDDFSIDCNDEGANFVVAKVNCNIAKFLSNPDLNSLDKFLPVSFFHEISIGDHVTNIQVNVFVCGGIAIGFCISHKILDGGTLGIFLKMWTERIGSDRNLKPLTEPNFTTKSLFPTSTLRLRDLSMLRLRDLSMESWGSYSEEGNWVTKRFLFTSSAIDTLKAQVLANSSSDPSKNHASHVQIVSAFLWKCFMTASKVQFGIQSPSMITHVVNLRPIIKKFLHQENSIGNFLWITPIEHLSGHELNLNELVTKLRDSIQQVDKDFVARLQSEEEGISIMEGALTRNMGEALETLGFTSWCKSGFYDVDFGWGKPIFKDGIEAWVILDEKKMNLLMSSTELLTYATLDPSPLAMASNSRL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271865g00042 439 PANTHER F21J9.9 7 424 - -
Stsc271865g00042 439 Pfam Transferase family 5 398 - -
Stsc271865g00042 439 Gene3D - 224 423 IPR023213 -
Stsc271865g00042 439 Gene3D - 3 201 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271865g00042 Stsc-Chr271865 260137 261525 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271865g00042 4 396 Monolignol Biosynthesis Gene Families AT5G48930 26.366 2.12e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271865g00042 - - aip:107628104 531.561