Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271865g00037 ATGCTCACCCAAGGATTCTGCAATAGAGGCCAAAAGAAAATTACCTATAGAATTCTCAGATGTAGAGATTTGTCCATTCTTTTGCGAAGGTTCACCACCTGGGTCACCACCTCACACAATCTTTCTGAATTCCCCAAGAGATTAGAATTGCTTAAACAATCACTATCCGAGACACTAACTCAATTCTACCCTCTTGGTGGTAGGATCAAAGATGATTTGTCCATTGATTGTAATGATGAAGGTGCTAACTTTGTAGTTGCAAAGGCAAATTGTCCTATTTCAAAGATTCTAAGCAAGCCTGACATGTATTCATTGGACAAGTTAACTTTTCTTCCTATTTCATTCTTCCATGGAACATCAATAGGAGATCATGTTACTAACATTCAAGTCAATGTCTTCGATTGCGGCGGAATCGCCATTGGACTTACCATTTCTCATAGGATCCTTGATGGTGATTCACTTAACACCTTTCTGAAAGAAACAACATGGGTCACTAGGAGGTTCTTGTTCACAAATTCAACTTTAGCCGCCCTGAAGGCTCAAATTTCGGCGAAATCTTCAGGCATTGAAGAATCATCCTACACGTGTCCAAATAGTTTTTGCCTTGTTGTGGAAGTTTTTCATGGCCGCGTCGAAGAAACAATGTGGAACTCAAAGGCCTTCTTTGGTGACCCAGAACACATGGCTGAGCATGAGTTGAGTTTGGAAGATGAATTGGTGAGTAAATTAAAGAGCTCAATTCAAAAAGTTGATAAGAATCTTGTTGCAAGAATTCAAAGTGTTGAGGGAAGTTCAATTATAGAAGATGGTCTTAGGGATCTCTGTTCAATAAACCAGGGGTTGAGGCATTGGAGAGACTAA 861 0.3984 MLTQGFCNRGQKKITYRILRCRDLSILLRRFTTWVTTSHNLSEFPKRLELLKQSLSETLTQFYPLGGRIKDDLSIDCNDEGANFVVAKANCPISKILSKPDMYSLDKLTFLPISFFHGTSIGDHVTNIQVNVFDCGGIAIGLTISHRILDGDSLNTFLKETTWVTRRFLFTNSTLAALKAQISAKSSGIEESSYTCPNSFCLVVEVFHGRVEETMWNSKAFFGDPEHMAEHELSLEDELVSKLKSSIQKVDKNLVARIQSVEGSSIIEDGLRDLCSINQGLRHWRD 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271865g00037 286 Pfam Transferase family 43 168 - -
Stsc271865g00037 286 Gene3D - 25 185 IPR023213 -
Stsc271865g00037 286 PANTHER F21J9.9 40 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271865g00037 Stsc-Chr271865 238789 239868 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271865g00037 49 163 Monolignol Biosynthesis Gene Families AT5G48930 33.333 2.38e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271865g00037 - - ahf:112729054 228.794