Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271865g00036 ATGGAAGAACTTGAAGTTGAAATCTTTTCCAGAGAAGACATTAAGCCTTCTTCTCCCACACCCTCTCACCTAAGAACCTTCAAACATTCTATTTTGGATCAAGTTAATCCTTTTCATTATGCCCCAGTTGTTGTATTCTACACCTCACACAATCCCTCTGAATTCCCCAAGAGATTAGAATTGCTTAAACAATCACTATCTGAGATACTAACCAATTTCTACCCTCTTGGTGGCAAAATCAAAGATAAATTTTCCATTGATTGCAATGATGAAGGCATGGACAGAAAGAACTGTTGGGCATCGCGATCATGCCCCATGCAGAAGATATCAAACCAACATTGGGGTTATATCCTTAAAGAAGGAAATTGGATCACAAAGAGGTTTTTATTCACAAATTTAGCTATAGCCACTCTCAAGGCTCAAATACTGGCGAAATCTTTGGGTGATCCATTGAAGAATCATCCTACACGTATCCAAATAGTTTCTGCATTGTTGTGGAAGTGTTTCATGGTTGCTTCGAAGGCACAGTTTGGAACTCAAAGGCCTTCTTTGGTGACTCATACGGTGAACCTTCGCCAGGTAATGGAAAAGTCTCTTGATCCTGAGAATTCTATAGGGAATTTTCTTTGGTTTTGTACATCAGAACACACGGGTGAACATGAGTTGAGTTTGGATAAGTTAGTTAGCAAATTGAAGAACTCAATTCAACAAGTTGACAAGGATCTTGTTGCAAGATTTCGAAGATACGAGGATGCAAGTTCAATTGTAGAAGATGATGTTAGGAATCTTTGCAGTAAAACACAGGGTGAGGCATTCGAAACATTAGGTTTTTCTAGCTGGTATAACTTTGGAGTATATGATAGTGATTTTGGGTGGGGAAAACCTATATGGGGTAGTCCTATTGGTTTAAGAAATACTTTAGTGTGTATGAATACAATTATCTTGATTCAAACTAGGTTCAGAGATGGTATAGAAGCTTGGGTTACCCTGGAGGAGGAGAAAATGAAACATTTTGAGTCATGCTCTGATTTGCTCACTTATGCAACTCTTGATCCAAGTCCTTTGACAATGGGGTCCACAGGATCTAACTCAAAGTTATAG 1101 0.3869 MEELEVEIFSREDIKPSSPTPSHLRTFKHSILDQVNPFHYAPVVVFYTSHNPSEFPKRLELLKQSLSEILTNFYPLGGKIKDKFSIDCNDEGMDRKNCWASRSCPMQKISNQHWGYILKEGNWITKRFLFTNLAIATLKAQILAKSLGDPLKNHPTRIQIVSALLWKCFMVASKAQFGTQRPSLVTHTVNLRQVMEKSLDPENSIGNFLWFCTSEHTGEHELSLDKLVSKLKNSIQQVDKDLVARFRRYEDASSIVEDDVRNLCSKTQGEAFETLGFSSWYNFGVYDSDFGWGKPIWGSPIGLRNTLVCMNTIILIQTRFRDGIEAWVTLEEEKMKHFESCSDLLTYATLDPSPLTMGSTGSNSKL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271865g00036 366 Gene3D - 122 346 IPR023213 -
Stsc271865g00036 366 Gene3D - 3 121 IPR023213 -
Stsc271865g00036 366 PANTHER F21J9.9 118 348 - -
Stsc271865g00036 366 Pfam Transferase family 121 340 - -
Stsc271865g00036 366 Pfam Transferase family 5 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271865g00036 Stsc-Chr271865 234055 235385 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271865g00036 256 339 Monolignol Biosynthesis Gene Families AT5G48930 29.412 2.81e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271865g00036 - - aip:107646498 431.795