Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271865g00022 ATGGCTGGTGCACTTGTTGGTGGAGCTTTTCTCTCTGGCTTCATTAACGTTCTCTTTGACAGGTTCCTAACAACTGATGCAGTCAACTTGGTGTTGGGCAAGAAGCTTGGCTCTGACTTGGTTGAAAGGCTGAAGATTTCCCTGCTTGCTGCTGAAGCTCTGGTTGATGATGCTGAGTACAAGCAACTGGGCGACCAACGTGTGAGGGAGTGGCTCAACTGTCTTAGAGATGCTGTTTACGATGCTGAAGACTTGCTGGACGATCTTCTCACCAAAGCTGCTACTCAAAAGGAGGTACGTTCTTTCTGGCCCAGTTTCCTCCTCAACCATGATAGGGAGATGGTAGATAAGATTGAAGGGGTAGTTACAAGGATAGAATTTCTTGAAAAGCAAAAAGATTTCCTTGGTCTTCAAAAGAATACCAAGGATAATAAGTTGTCATCATCATCATGGAGAGCATCTACATCTCTGATGGAAGGGAATATATATGGCAGGGAGGATGATAAACAAGCTTTGCTCAAAATAATAAATGACAATAGTGAAAGTCAGTTATCTGTGATTCCAATTGTTGGTATGGGTGGGGTTGGTAAAACAACCTTAGCAAAGCTGGTGTACAATAACAAAGAGGGATTTGATTTGAAAGCATGGGTTTGTATCTCTGAAACATTTGATGTTGTTGAGATTACAAGGAAAACCATTGAGGAAATTACTAAAAGTACTTGTACCCTTGGGAGTTTAAATTTGCTTCAAAATAAATTGCAGGAGATCTTGTCCGAAAAGAAGTTCTTTATTGTTCTAGACGATGTCTGGAGCAATGATGTCGATATCTGGAAGAAATTTATAACTCCTTTTCACTGTGGGGCTAAGGGTAGTACAATCCTTCTAACAACTCGAATCCAAGAGGTTGCTTCTGTAGTTCAAACATGTCCCTCTTACTTTCTTAATGAGTTGTCAGAAGATTATTGTTGGTTGCTGTTCGCAGACAATGCTTGTTTTCCGGAGTCAAACGGGAATTCAACACTCAAGGAAATCGGTAGAAAGATTGTGAAGAAGTGTAAGGGTTTGCCATTAGCTGTAGAAACACTTGGGCGCTTGTTGCGAGGAAAGGATGACGCTAAAGAATGGAATGCTGTTTTAACAAGTGACATCTGGGAATTTTCTATGAAAAATAGTAAAATTATTCCAGCATTGTTAATAAGCTACCTTCAGCTTCCTGCCTATTTGAAGCGTTGTTTCATTTATTGTACATTATACCCCAAAGATTACGGCTTCGATAAAGATGAACTAATCTTGTTGTGGATGGCCGAAGATCTCTTAAGGCCACCAAAGAGAGGAGAGAGTTTAGAAGAAGTTGGTTGCGAGTGTTTTGAAGAATTAATTTCCAGGTTATTCTTTAAACAATACGAGAAATTTTATAAGATGCATGATCTGTTGCATGACCTGGCTGTTTTCCTTGCTGGAGACTTCTATTGTAGATTAGAAGGGCATGGTAAAGCAAAAGGAGTGACTACTTTGACTCGACATTTGTCCTCTAACAGCATCTCAGAGAATTATGATTTCATCAATGAAGTTAAATCTTTGAGGACATTCTTGCCATGCAGTTACTTTCATTTCTTCGGTGACATTGATGATGTAACTGTTTGTATCTTAATATCGAAGCTCAAATATTTGAGAGTTTTGTCATTTGTCCGGTCCCCAAAACTTGATGTACTCCCTGATTCAATAGGGGAATTGATTCATCTACGCTATCTGAATCTTTCTAGAACTAATGTTATGACATTACCTGAGTCATTATGCAACTTGTATAATCTACAGACATTAATATTGTTCAGATGTAAAAGGCTGACCATGTTGCCCAATGGCATGCATAATCTTGGGAATTTACAACATCTTGATCTTAGGTCAACTTCTTTGAACGAAATGCCAGGAAGATTAAGCAAATTGAAACACTTGAGAATTTTAGATTACTTTGTTGTGGGCAAGCAGGAAGATAATGGAATCCAGGAATTAGGAGGGCTCTCAAATCTTCAAGGTTCATTTAAGATTACGAAGTTGGAGAACATTGTTGATGCTGCGGAAGCAAAAAATGCAAGAATGATGAATAAGATACACATCAATGAATTATGGTTGGAATGGTCTTCAGGTGATAATATGATTTCAATTTCAAACACGCAAACTGAAAGAGAGATACTCAACAGCTTGCAACCGCACAATGGCTTGAAAGAATTGAGAATCATGGGATATAGGGGTACAGTATTTCCAGATTGGTTGGGGTACTCTTCCTACGAAAACATGACGAGTGTATCTCTGATAGGTTGCAAGAATTGCTGCCTGCTGCCTTCACTTGGACAACTGCCATCTCTTAAGTCCCTATACATTCAAAGTTTTGGTCAGTTAGAGAGTGTTGGCATGGAGTTTTACAAGAATGAAGGCGATCATCATTTGTTGCCTATTGATCTGTTTCCCTCACTGGAAATATTGGAATTTCATGACATGCCATGTTGGGAGTTGTGGCACTCACCTGACTCGGAAACTTTTCCTCAACTCAAGAAGCTTCAGATAAGACATTGTCCAATGCTGAAAGGTGATGATATGCTTAGTCGCGTATTCTTGAGAATGATTTCCTCTTGGAAAGTTTGCAAACTAAGGATAAGGGAGGATCGTGGAAGGTCGTCTCAAGAGATGTTAATGGATGGAGAGACTTTATCAATTATTGCAAGTGAGTCGGTGGTGCAGTTTGCATTTAAATCAATGAGCATCAACCATCTAACTTGCCTCCAAGAAATACAAATCTCAGGCTATTCATCTGCTGTATCCTTTCTGGGGAATTATTTACCCAAATCTTTGCAAAAGCTTGAAATTTGGTGTTGCGAAAAACTAGAATTCCCCCAACAACAGTGGAAGCATGATTTGGAAGAGCTACGAATAGCATATAGCTGCGATTCACTCACCTCATTCTCCTTGGATGCTTTTCCCAATCTCAAAACTCTCAAGATAGATGGGTGTGAGAATCTGGAATCACTTTCAATGTCAGAACCACCACAAGCTGCTCTTGAATCTCTCTCAATCAATGGGTGCCCCGAATTTGTGTCATTTCCAGGAGAAGGACTTGCTGCACCCAACTTGACTCATCTCTATCTCAGCTACTGCTCCAAGTTGGAGGCATTGCCGAGTCACATGAACACTCTTCTACCAAATTTACACACACTCCAGATATGTGATTGCCCAAGAATTTGTAGGGTTCCAGAGGGCGGCTTGCCGCCTAACATGAAATCAGTTACTGTGGGAGGTTATGAGCAACAAGTGAAGGATCTATCATGGATGGGCAAATTGGATGCCCTCACTCATCTTACTATTGATGGTCATTTCTGTGAGAGTGTCAAGTCATACCCAGAGGTGGGTTTGCTGCCTCATCTTCCCTCTCTTACCACTCTACAGATCAGTTGGTTTCATAATTTGGAGACTTTTGAGTGCAACCAGCTTCTCCACCTCGCCTCCCTCCAAAAACTACACATTTCAAACTGTGAAAAGATGGAGAATATGGCTGGAGAAAAGCTGCCTTCCTCTCTTTTACAACTTGAAATTCAAGACTGTCCTTTGCTGGGAGAACACTGCAAGAAGAAGCATCCACATATTTGGCCCAAAATTGCCCACATCCCCACCATTCTAGTCAATGGCCAACAGATTGATTTTCCACCGGGCAGCTTGTAA 3711 0.4058 MAGALVGGAFLSGFINVLFDRFLTTDAVNLVLGKKLGSDLVERLKISLLAAEALVDDAEYKQLGDQRVREWLNCLRDAVYDAEDLLDDLLTKAATQKEVRSFWPSFLLNHDREMVDKIEGVVTRIEFLEKQKDFLGLQKNTKDNKLSSSSWRASTSLMEGNIYGREDDKQALLKIINDNSESQLSVIPIVGMGGVGKTTLAKLVYNNKEGFDLKAWVCISETFDVVEITRKTIEEITKSTCTLGSLNLLQNKLQEILSEKKFFIVLDDVWSNDVDIWKKFITPFHCGAKGSTILLTTRIQEVASVVQTCPSYFLNELSEDYCWLLFADNACFPESNGNSTLKEIGRKIVKKCKGLPLAVETLGRLLRGKDDAKEWNAVLTSDIWEFSMKNSKIIPALLISYLQLPAYLKRCFIYCTLYPKDYGFDKDELILLWMAEDLLRPPKRGESLEEVGCECFEELISRLFFKQYEKFYKMHDLLHDLAVFLAGDFYCRLEGHGKAKGVTTLTRHLSSNSISENYDFINEVKSLRTFLPCSYFHFFGDIDDVTVCILISKLKYLRVLSFVRSPKLDVLPDSIGELIHLRYLNLSRTNVMTLPESLCNLYNLQTLILFRCKRLTMLPNGMHNLGNLQHLDLRSTSLNEMPGRLSKLKHLRILDYFVVGKQEDNGIQELGGLSNLQGSFKITKLENIVDAAEAKNARMMNKIHINELWLEWSSGDNMISISNTQTEREILNSLQPHNGLKELRIMGYRGTVFPDWLGYSSYENMTSVSLIGCKNCCLLPSLGQLPSLKSLYIQSFGQLESVGMEFYKNEGDHHLLPIDLFPSLEILEFHDMPCWELWHSPDSETFPQLKKLQIRHCPMLKGDDMLSRVFLRMISSWKVCKLRIREDRGRSSQEMLMDGETLSIIASESVVQFAFKSMSINHLTCLQEIQISGYSSAVSFLGNYLPKSLQKLEIWCCEKLEFPQQQWKHDLEELRIAYSCDSLTSFSLDAFPNLKTLKIDGCENLESLSMSEPPQAALESLSINGCPEFVSFPGEGLAAPNLTHLYLSYCSKLEALPSHMNTLLPNLHTLQICDCPRICRVPEGGLPPNMKSVTVGGYEQQVKDLSWMGKLDALTHLTIDGHFCESVKSYPEVGLLPHLPSLTTLQISWFHNLETFECNQLLHLASLQKLHISNCEKMENMAGEKLPSSLLQLEIQDCPLLGEHCKKKHPHIWPKIAHIPTILVNGQQIDFPPGSL 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271865g00022 1236 Gene3D - 146 311 IPR027417 -
Stsc271865g00022 1236 SUPERFAMILY L domain-like 923 1206 - -
Stsc271865g00022 1236 Gene3D Ribonuclease Inhibitor 907 1095 IPR032675 -
Stsc271865g00022 1236 Gene3D Ribonuclease Inhibitor 545 688 IPR032675 -
Stsc271865g00022 1236 Gene3D Ribonuclease Inhibitor 702 870 IPR032675 -
Stsc271865g00022 1236 PANTHER DISEASE RESISTANCE PROTEIN RP 68 857 IPR044974 GO:0006952
Stsc271865g00022 1236 Gene3D Ribonuclease Inhibitor 1099 1219 IPR032675 -
Stsc271865g00022 1236 Pfam NB-ARC domain 166 380 IPR002182 GO:0043531
Stsc271865g00022 1236 SUPERFAMILY L domain-like 473 867 - -
Stsc271865g00022 1236 Coils Coil 682 702 - -
Stsc271865g00022 1236 Gene3D - 20 127 - -
Stsc271865g00022 1236 Pfam Rx N-terminal domain 38 98 IPR041118 -
Stsc271865g00022 1236 SMART LRR_typ_2 578 601 IPR003591 -
Stsc271865g00022 1236 SMART LRR_typ_2 625 648 IPR003591 -
Stsc271865g00022 1236 FunFam Probable disease resistance protein At1g61300 146 309 - -
Stsc271865g00022 1236 PRINTS Disease resistance protein signature 186 201 - -
Stsc271865g00022 1236 PRINTS Disease resistance protein signature 256 270 - -
Stsc271865g00022 1236 PRINTS Disease resistance protein signature 352 366 - -
Stsc271865g00022 1236 PRINTS Disease resistance protein signature 989 1005 - -
Stsc271865g00022 1236 Gene3D - 316 399 IPR042197 -
Stsc271865g00022 1236 Gene3D - 400 483 IPR036388 -
Stsc271865g00022 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 415 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271865g00022 Stsc-Chr271865 119232 123896 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271865g00022 187 482 WRKY Transcription Factor Family AT5G45050 25.321 1.07e-11 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271865g00022 - - adu:110277908 1457.58