Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271864g00034 ATGGACGCCTCCTTCCCACGCCGGAAAGACAAGGTCGTCGTCATCATGGGCGCCACCGGCTCCGGCAAATCCCGCCTCTCTCTAGACCTCGCCTCCCTCTTCTTCCCCTTCTCCGAACTCATCAATTCAGACAAAATGCAAGTCTACAACGGCCTCGAAATCACAACCAACAAGATCCCCATTCACGAGCGCAACGGCGTCCCTCATCACCTCCTCGGCGACGTATCCCCTTCCCACGGCGAGTTCACCCCCTCCGACTTCCGCCTCCGCGCCGGACAAATCATCTCCGATATCACCTCCCGGGATAAGCTCCCCATCGTGGTTGGCGGGTCCAACTCCTTCGTCCACGCACTCTTGGTGGAAAGATTCGACCCGGAGTTGAACGTGTTTGATGGTGGCGACGCTGAGATATCGCCGGAGTTGAGATACGAGTGCTGCTTCCTGTGGGTGGATATCTCGTTCAATGTGTTGAGAGATTACTTGTTGAAGCGAGTGGACGACATGCTTGACTCAGGAATGGTGGAAGAGTTAGCTGAGTTCTTCGACCGGGACTCGCCCGATTTGGAACTCGACTCAGCCAGCCGAACCGGTTTGAGAAAAGCCATTGGGGTGCCCGAGTTCGACCGTTTTTTTAAATTGTATCCTCCTGGTTGCAAGGATTCACTGCGGACGCCTGCATACCAGGAAGCCGTGAGGGCCATAAAGGATAACACGTGTCAGCTCGCTAAGAGGCAGATACAAAAGATCCACCGTTTAAAAGCAGCCGGCTGGGACTTACGGAGGATAGACGCCACGGAGGCTTTTCGGGTTGTGCTCTGCTCTCGGGAGATTGGAGGAATGGGAAATGGCCATGGCCGTTGGCGACCAAATTTTGGTTTCTGTTTATGTGATGAGGTTCCACAGTTTTACTCAAGGCTGGTTTTCGTGGCAAGAATGTAA 939 0.5421 MDASFPRRKDKVVVIMGATGSGKSRLSLDLASLFFPFSELINSDKMQVYNGLEITTNKIPIHERNGVPHHLLGDVSPSHGEFTPSDFRLRAGQIISDITSRDKLPIVVGGSNSFVHALLVERFDPELNVFDGGDAEISPELRYECCFLWVDISFNVLRDYLLKRVDDMLDSGMVEELAEFFDRDSPDLELDSASRTGLRKAIGVPEFDRFFKLYPPGCKDSLRTPAYQEAVRAIKDNTCQLAKRQIQKIHRLKAAGWDLRRIDATEAFRVVLCSREIGGMGNGHGRWRPNFGFCLCDEVPQFYSRLVFVARM 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271864g00034 312 Pfam IPP transferase 47 121 - -
Stsc271864g00034 312 Pfam IPP transferase 139 247 - -
Stsc271864g00034 312 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 183 IPR027417 -
Stsc271864g00034 312 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 269 IPR039657 -
Stsc271864g00034 312 Gene3D - 9 274 IPR027417 -
Stsc271864g00034 312 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 154 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271864g00034 Stsc-Chr271864 250830 251961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271864g00034 142 266 C2H2 Transcription Factor Family AT2G27760 29.605 1.77e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271864g00034 K10760 - qsa:O6P43_025717 390.578