Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271864g00014 ATGTACTGTTGTGTTATCATTAGCATCATCCTCTACTCTCTGTTGAGCATAACCACTTTGTGCACTGTTGTGGATCCACACTTCCTGGCATGTGAACCCCAAACATGCCGCAACCAATCCATAACATACCCCTTCTACATCCAAGGTAAACAGGAATCTTTCTGTGGCTACCCTGGTTTCGCCATCTCTTGTGATACTAATAATGCCTTCCCAATTCTCAATCTCTCTAGTACTCCTTACATCATCCATCAAATATTCTACCAAAACGAATCACTCAGAGTCTCCAATGCTGCCTTTTCATCAGCCAACAACAAAACAACAGATTATTGTGTTTCTGCTACACACAACCTCACCCTTCCTCCAACCAATACCTTCATTCTTCCTCAGAATAATAATAAGGAAATCTTACTCTTCTACGGCTGTAACCTCTCATCCATGCCAAGTGAGTTGATGGACTACAGAATCGAGTCTTGTGAAGGGAACAACAAAACTGGTGGTTCGGTTCTCGCATTGTATAAGGACGATGTAGAAACAGTAAATTTGGCATCCATGAGTTGTGGAACGGGCGGAGAGGTGGTGGAAGCGGTGGTGGAAGAGGAAAAGAGTAGTGGAGGAGGAGGAGGGATAGAAGAGGCGCTGAGGAGAGGGTTCATGCTGAATTGGACTGCCAGTGATTGCAAGCTGTGCAGTAGCGCGGGAGGAAGGTGTGGCTTCAATTCAAGTATGTACATTTTCCAGTGTTACTGCACTGATAGCATTCATCTTTCTAGATGTGTTATTCAAGATGGCAGAAGTAAGGCTTCCATGAAGATGGGAATTGCACTCGGACTAGGTTCCGAAATAAGGACTGCGGTAGTTACTCTGCTGTTAGTAATGGGGACCCTCTTCTACAGAAGATGGAAGAAGCAAAACCCGAAACACCTTCTGGTTGATGCCTTTTTGGAGAGACATGGACATCTTCAAATCAAGAGGTACAGCTATTCCGAAATGAAGAAAGTGACCAACTCCTTCAAAAACAAACTAGGCGAAGGGGGATTTGGCAGTGTATACAAAGGACAATTGAAGGATGGGCGACATGTTGCAGTGAAGATCCTAAGTGAATTGAAAGGTGATGGTGAGGACTTCATCAATGAAGTTGCGAGTATGAGCAGAACCTCTCATGTTAACATTATTGCTCTTCTTGGCTTCTGCTTTCAAGGTTCCAAACGAGCTTTGATTTATGAATTTATGCCAAATGGCTTGCTTGAGAAGTTAATCTATGAAGATAATGCTATGATAGGGGATCACCAATTGAATTGCCAAACTTTATATGATATTGCAATTGGTGTTGCTCGAGGACTTGAATATCTGCATAAGGGTTGCAATACTAGAATCTTGCATTTTGACATAAAGCCTCATAACATTCTATTAGATGAAAATTTCTGTCCCAAAATTTCGGACTTCGGACTTGCAAAAGTTTGCACAAGAAAAGAAAGTATAATATCAATATTTGGTGCTAGAGGGACTGCAGGTTATATTGCCCCTGAGGTATTTTCTAGAAACTTTGGTGTAGTATCACATAAGTCGGATGTTTACAGTTATGGAATGATGGTCTTAGAAATGGTTGGAGGAAGAAAGAATATCAAAGCTGAAGTTGATGCATCAAGTGAGATATATTTTCCATATTGGATACACAATAGACTTGTGTCAAATCAACAGCTTGGTCTGCAGAGTATAAGCAATGAATTTGATAACGAGAAGGTAAGAAAGCTGACAATGGTGAGCTTATGGTGCATTCAAACTAACCCTTCAAACCGGCCATCAATTAGTAAGGCAGTGGAAATGCTAGAAGGAAGAGCTGAATTGCTGCAATTGCCCCCTAAACCATTTTGGTATTCTCCCACGGCCTCTCCGTAA 1896 0.4177 MYCCVIISIILYSLLSITTLCTVVDPHFLACEPQTCRNQSITYPFYIQGKQESFCGYPGFAISCDTNNAFPILNLSSTPYIIHQIFYQNESLRVSNAAFSSANNKTTDYCVSATHNLTLPPTNTFILPQNNNKEILLFYGCNLSSMPSELMDYRIESCEGNNKTGGSVLALYKDDVETVNLASMSCGTGGEVVEAVVEEEKSSGGGGGIEEALRRGFMLNWTASDCKLCSSAGGRCGFNSSMYIFQCYCTDSIHLSRCVIQDGRSKASMKMGIALGLGSEIRTAVVTLLLVMGTLFYRRWKKQNPKHLLVDAFLERHGHLQIKRYSYSEMKKVTNSFKNKLGEGGFGSVYKGQLKDGRHVAVKILSELKGDGEDFINEVASMSRTSHVNIIALLGFCFQGSKRALIYEFMPNGLLEKLIYEDNAMIGDHQLNCQTLYDIAIGVARGLEYLHKGCNTRILHFDIKPHNILLDENFCPKISDFGLAKVCTRKESIISIFGARGTAGYIAPEVFSRNFGVVSHKSDVYSYGMMVLEMVGGRKNIKAEVDASSEIYFPYWIHNRLVSNQQLGLQSISNEFDNEKVRKLTMVSLWCIQTNPSNRPSISKAVEMLEGRAELLQLPPKPFWYSPTASP 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271864g00014 631 FunFam PR5-like receptor kinase 410 620 - -
Stsc271864g00014 631 PANTHER RUST RESISTANCE KINASE LR10-RELATED 312 626 IPR045874 GO:0004672
Stsc271864g00014 631 Gene3D Phosphorylase Kinase; domain 1 313 409 - -
Stsc271864g00014 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Stsc271864g00014 631 Pfam Wall-associated receptor kinase C-terminal 180 251 IPR032872 -
Stsc271864g00014 631 FunFam serine/threonine-protein kinase PBS1-like 309 409 - -
Stsc271864g00014 631 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Stsc271864g00014 631 SMART serkin_6 335 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc271864g00014 631 SUPERFAMILY Protein kinase-like (PK-like) 319 610 IPR011009 -
Stsc271864g00014 631 Gene3D Transferase(Phosphotransferase) domain 1 410 621 - -
Stsc271864g00014 631 Pfam Protein kinase domain 338 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc271864g00014 631 Pfam Wall-associated receptor kinase galacturonan-binding 31 95 IPR025287 GO:0030247
Stsc271864g00014 631 ProSiteProfiles Protein kinase domain profile. 335 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271864g00014 Stsc-Chr271864 65539 68209 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271864g00014 10 622 Receptor kinase-like Gene Family AT5G38260 41.374 2.89e-146 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc271864g00014 Pkinase 5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271864g00014 - - ahf:112712060 1006.13