Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271863g00023 ATGCTCCCTAAAACCCTAACTGCCACTCTCTTCCTTAACCTAACCCAACCTCCTTTACTATTTCGCTCTTCATCTCCCCGACCAACCTCCTTCGTTCGAGTAATGAGCTCCGAGTCGACCCAGCGAGTCTTCCAGCTCAAGCACGACCCTTTAACCGGCAACTCCGAATGGGTCATCATTGAAGACCAAAACGACGACGTTCCAAACTTCCCCAACCACCAGCACCTTCTCGCTACGACGTCGTATTTGGATATGCTCAACGATTCCCCAAGAAACACAGCATTTCGACAGGCCATTGAGAAAACCATCACCAAACCTTGCCGCGTTCTTGATATCGGTGCTGGAACTGGGTTGCTATCGATGATGGCTTCAAGAGCTATGGGTGGTGAAGGGTTTGTGACGGCGTGCGAGTCTTACCTTCCGATGGTGAAGTTGATGAAGAGAGTGTTGCGTGTCAACGGAATGGAAAGAAGAATCAGAGTCATCAATAAGCGTTCTGATGAACTCCATGTTGGTGTTGATGTGCCTTCACGTTTTGATGCACTTGTGAGTGAGATATTAGACTCAGAATTGCTGGGTGAGGGGCTTATACCGACCCTGCAACATGCGCATGACAGTTTATTGGTGGAAAACCCTTTGACCGTGCCATATCGAGCAACGACATACGGGCAGCTGGTTGAGAGCACATTCCTATTGAAGCTGCATGATTTACATAACAATGAAGCCAGTGCATCTGATGGAATTTGCCTTACCCCTACAGGACTTGAGAGTGTTTTAGGCATCAAACGTCAGCAATATGCTATGCATTGTGATCCAATAGGGAAAGAAATAAAGTTGCTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGACCAGAGAGTTGTGGAGAAACTGAGCTGTGCATAAAGGCAACTACTGGTGGTAGTGTTCATGCCGTTGTCTCATGGTGGGTACTTCAACTTGATCGTGAAGGAACAATCTATTACTCCACTGCTCCTAGGCGGACAAACTCAACAACCAGTACAAGTTCTGTTCATTGGTGTGACCACTGGAAACAGTGTGTTTGGTTCGTTCCTGGCAGTGGTGTTACGGTATCCAAAGGGGAAGAAGTTCATGTACATGCTACTCATAATGAAACTAGTATCTCATATAGCTTATATGCTAAGGGGCTAAAAACTGAGGTTTTGCACCATGGACTGAAAGCTGGAGACTTGCATCTTGTACTATCCCCAGAAAGGGCTGCAATCTATGGAGACAAAGAATGGAGGCTTTTAATGCGGAAAGCTGTAGAAAGTGCATTAAAGGGAAAAAGTCGTCCATTATGCTTGATTACGGATGATAGTGTATTTTTACCTCTCCTTGCGGCGCATCTTTCTGAAGAATCACATGTAATTTCATTATTTCCGGGGCTGATGGAAAGAGGTTCTCAGTATTTGCAAGCTGTTGCTCGGTCAAATCATATATCACCTGATCGCATAGAAGTTCTCGGAAAAAGGGTGAAACAGCTCACCATAAATGATACGCACAATAAAAAGGTTGATCTGTTAATTGCAGAACCTTTCTATCTTGGACTTGATTGCATGCTTCCATGGCAGAACCTGCGTTTTTGGAACGATCGGACCATGCTTGATTCCATCCTCGCTTCAGATGCTGTGGTTATCCCAAGCAGAGGAATGTTGAAAGCTTGTGCCATCTCTCTTCCTGATCTTTGGAAAAGTCGCCATTGCTTGAATAAGATAGAAGGTTTTGACCATACGGTGGTAAACTCTACAATGGGGGCTTGTGGTCAACTACCTGGATCGGAAGAGGGTCCTTGTCTGCCGTACTTCGTCTGGCAGTGTGGAGATTTTGATGTGCTTAGTGAGACATTTGATGTGATGGAGTTTGATTTCTTAAAACAAATAAGCCAATGTCAAGGAAGATCTCAGGTTAAATTCACCAAGGCCGGGGTATGCCATGGATTTGTACTATGGATTGATTGGGTGATGGATCCACAAAATTCTTATGTGATATCAACTGGTCCAGGTCACACCCAATTCCCTTATGAATATTGA 2064 0.4462 MLPKTLTATLFLNLTQPPLLFRSSSPRPTSFVRVMSSESTQRVFQLKHDPLTGNSEWVIIEDQNDDVPNFPNHQHLLATTSYLDMLNDSPRNTAFRQAIEKTITKPCRVLDIGAGTGLLSMMASRAMGGEGFVTACESYLPMVKLMKRVLRVNGMERRIRVINKRSDELHVGVDVPSRFDALVSEILDSELLGEGLIPTLQHAHDSLLVENPLTVPYRATTYGQLVESTFLLKLHDLHNNEASASDGICLTPTGLESVLGIKRQQYAMHCDPIGKEIKLLSEPFKIFEFDFWKRPESCGETELCIKATTGGSVHAVVSWWVLQLDREGTIYYSTAPRRTNSTTSTSSVHWCDHWKQCVWFVPGSGVTVSKGEEVHVHATHNETSISYSLYAKGLKTEVLHHGLKAGDLHLVLSPERAAIYGDKEWRLLMRKAVESALKGKSRPLCLITDDSVFLPLLAAHLSEESHVISLFPGLMERGSQYLQAVARSNHISPDRIEVLGKRVKQLTINDTHNKKVDLLIAEPFYLGLDCMLPWQNLRFWNDRTMLDSILASDAVVIPSRGMLKACAISLPDLWKSRHCLNKIEGFDHTVVNSTMGACGQLPGSEEGPCLPYFVWQCGDFDVLSETFDVMEFDFLKQISQCQGRSQVKFTKAGVCHGFVLWIDWVMDPQNSYVISTGPGHTQFPYEY 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271863g00023 687 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 82 385 IPR029063 -
Stsc271863g00023 687 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 480 680 IPR025799 GO:0016274|GO:0018216
Stsc271863g00023 687 CDD AdoMet_MTases 108 184 - -
Stsc271863g00023 687 PIRSF Arg_N-mtase 41 686 IPR014644 GO:0006479|GO:0008168
Stsc271863g00023 687 Gene3D - 562 684 - -
Stsc271863g00023 687 Gene3D Vaccinia Virus protein VP39 74 217 IPR029063 -
Stsc271863g00023 687 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 396 687 IPR025799 GO:0016274|GO:0018216
Stsc271863g00023 687 FunFam Protein arginine N-methyltransferase 75 217 - -
Stsc271863g00023 687 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 481 678 IPR029063 -
Stsc271863g00023 687 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 66 390 IPR025799 GO:0016274|GO:0018216
Stsc271863g00023 687 FunFam Protein arginine N-methyltransferase 7 408 558 - -
Stsc271863g00023 687 Gene3D - 218 400 - -
Stsc271863g00023 687 Gene3D Vaccinia Virus protein VP39 407 558 IPR029063 -
Stsc271863g00023 687 FunFam Protein arginine N-methyltransferase 1.6 218 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271863g00023 Stsc-Chr271863 200678 205753 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271863g00023 84 222 C2H2 Transcription Factor Family AT3G12270 29.730 2.77e-09 58.5