Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271863g00012 ATGGCGGCTGCAATGGCCGAGGCATCCTTGAGTTTGTCTAGAGCTGCTAGCCTTGTGATGTTAAATGATTCAGAAGAAGCAGTGATAGGTTTCTGGATTGGGATTGTTTGGCTTGTTGGAATGAATGCAATCATTGCTTTGTTGTCAGAATATGTGGTGCAGACTATAGAGGATGCATCAAATTCATGGGGCTTGTCTGTGAGTTTCATCAGCATAATCTTGATCGCGATAGTTGAAAATGCAGCCGAACACATCGGAGCTGTCATATTTGCTTTCAAGAACAAGCTGGACATCACATTAGGTGTTGCTTTGGGGTCTGCAACTCAGATTAGCATGTTTGTGGTTCCAATGTGTGTGATTGTTGGTTGGATCCTTGGCATAAAAATGGACCTCAAGTTCAACCCATGGAGACATGTTCTCTTGCTTTAG 429 0.4336 MAAAMAEASLSLSRAASLVMLNDSEEAVIGFWIGIVWLVGMNAIIALLSEYVVQTIEDASNSWGLSVSFISIILIAIVENAAEHIGAVIFAFKNKLDITLGVALGSATQISMFVVPMCVIVGWILGIKMDLKFNPWRHVLLL 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271863g00012 142 Pfam Sodium/calcium exchanger protein 35 134 IPR004837 GO:0016020|GO:0055085
Stsc271863g00012 142 Gene3D - 3 142 IPR044880 -
Stsc271863g00012 142 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 23 141 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271863g00012 Stsc-Chr271863 123893 124863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271863g00012 25 134 Antiporters AT3G51860 80.909 8.67e-56 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271863g00012 K07300 - gmx:100782052 191.43