Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2711g00001 ATGGAATTCCAAAGTGAAATGCAGGGAGCCAAACTGCTAAAAGCTCAAAGCCACATATGGAATCACATATTCAATTTCATAAACTCAATGTCTCTTAAATGTGCTGTTGAATTAGGCATACCTGATGCCATTCACAATTATGGCAAACCCATGCCACTCTCAAAACTCATTGCTTCGCTACCAATCCACCCGTCAAAAACCTCCTCGATCCAACGCTTGATGAGAATCTTGATCCATTCCGGATTCTTCGCCACAAACAGTGTCTCCAAGGATGATCACGAAGTTGAGTATGTGTTAACTGATTCGTCCATGCTTCTATGCAAGGACAATCAGTTAAGTCTGAGACCATTCTTACTTGCCATGCTGAATCCGATATTAACAAAACCATGGCATGAATTGTCCACATGGTTCCAAAGTAACATTCCCACACTATTTGAAATAGAACATAGGACAGTGTTGTGGGATTATGCTTGTCATGTGCCTAAACTTAATGAAATTTTCAATGATGCCATGGCAAGTGATGCTGGATTGGTTAGCAAATTGTTACTTGATGACAAGTGTAAAGGTGTGTTTGAGGGTTTGGAATCATTGGTTGATGTTGGTGGAGGCACCGGAACTCTTGCAAAGGCCATTGTCAAATCATTTCCACGGTTGGAGTGCACTGTTCTTGATCTCCCACATGTTGTTGCTGGCTTGGAGGGAAGTGACAACCTTAAATATATTGCAGGGGACATGTTTGAGGTCATTCCTTCATCCGATGTCATTTTGTTGAAGTGGATTTTGCATGACTGGAATGACAAAGAATGTTTGAAGATATTGAAAAATTGCAAGGAAGCAATCATGAGGAAAGGCAAAGGAGTGAAGGTTATTATCATAGAAATGGTAATAATGGAAGAAAATGAGATAAAATGTGATGATGAATCTGTTGAAACACAACTCTTCTCCGACGCGCTAATGATGGTGACGTTCGCAGGAAAAGAGCGAAATGAAAAAGAATGGGCCAAATTAATATTTTCTGCTGGTTTTAGTAACTACAAAATATCTCCAATTCTTGGATTAAGGTCTCTCATCGAGCTATATCCGTAG 1086 0.3996 MEFQSEMQGAKLLKAQSHIWNHIFNFINSMSLKCAVELGIPDAIHNYGKPMPLSKLIASLPIHPSKTSSIQRLMRILIHSGFFATNSVSKDDHEVEYVLTDSSMLLCKDNQLSLRPFLLAMLNPILTKPWHELSTWFQSNIPTLFEIEHRTVLWDYACHVPKLNEIFNDAMASDAGLVSKLLLDDKCKGVFEGLESLVDVGGGTGTLAKAIVKSFPRLECTVLDLPHVVAGLEGSDNLKYIAGDMFEVIPSSDVILLKWILHDWNDKECLKILKNCKEAIMRKGKGVKVIIIEMVIMEENEIKCDDESVETQLFSDALMMVTFAGKERNEKEWAKLIFSAGFSNYKISPILGLRSLIELYP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2711g00001 361 Gene3D - 3 106 IPR036388 -
Stsc2711g00001 361 Pfam O-methyltransferase domain 130 343 IPR001077 GO:0008171
Stsc2711g00001 361 SUPERFAMILY "Winged helix" DNA-binding domain 10 110 IPR036390 -
Stsc2711g00001 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 361 IPR016461 GO:0008168
Stsc2711g00001 361 FunFam O-methyltransferase ZRP4 108 361 - -
Stsc2711g00001 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Stsc2711g00001 361 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Stsc2711g00001 361 PANTHER O-METHYLTRANSFERASE 12 346 IPR016461 GO:0008168
Stsc2711g00001 361 FunFam Coniferyl alcohol 9-O-methyltransferase 2 106 - -
Stsc2711g00001 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 359 IPR029063 -
Stsc2711g00001 361 Gene3D Vaccinia Virus protein VP39 107 361 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2711g00001 Stsc-Chr2711 2126 3910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2711g00001 46 361 Monolignol Biosynthesis Gene Families AT1G51990 34.365 1.99e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2711g00001 - K16040 aip:107609507 504.597