Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc26g00018 ATGTCTGGTGGTACGAAGGGTGAACACCACCAAACGGTTCCGCTATCGGTGTTGCTGCAGCGTGAATTGGCGAGCGAGAAGATCGAGAAGCCAGAGATTGTTTCAGGGCAAGCAGGGCAGAGCAAGAAAGGGGAGGATTTCACCCTCATCAAAACTGAATGCCAGAGGGTCGTCGGAGATGGGGTCTCCACATTTTCTGTTTTTGGGCTATTTGATGGACACAATGGAACTGCTGCTGCTATTTATTCTAAGGAGAATCTTCTAAATAATGTTTTAATTGCAGGCTTTGTAAAAACTGACAAAGATTTTCAGGAGAAAGGACAAAAATCTGGAACCACTGTAACCTTTGTGATTATAGAAGGATGGGTTGTAACTGTTGCATCAGTTGGTGATTCACGTTGCGTACTTGAATCTGGTGAAGGTGGGCTTTATTATTTGTCAGCAGATCATAGGCTAGAAACAAATGAAGAGGAGAGGGTCCGCATCACCTCTAGTGGGGGTGAGGTTGGTCGGCTAAACACTGGGGGAGGCACAGAGGTTGGGCCTTTAAGATGTTGGCCTGGAGGCTTGTGTCTTTCACGTTCAATTGGCGATATGGATATTGGTGAATTTATTGTCCCAGTGCCGTATGTAAAGCAAGTGAAGTTGTCCACCGCTGGAGGCAGGCTAGTTATCTGCAGTGATGGGGTCTGGGATTCTCTATCTGCAGAAACAGTCTTAGATTCTTGTCGTGGCATGTCAGCAGAGACAGCAGCATCACATATTGTTAAAGAAGCTGTAGAAGCAAAAGGACTTAGAGATGATACAACTTGCATCGTTGTTGATATATTACCCCAGGAGAAGCCACCTGCTCCTGCACCTCAGCGAAAAAAGAAAGGAATAAAGTCCATGTTTCGTAAAAAGTCATCTGAGTCGTCTTCTTATAATGACAAAGACTACTTGGAGCCAGATGTGGTAGAGGAATTGTACGAAGAAGGATCTGCTATGCTTTCCGAGAGGTTAGATACAAAATATCCGCTCTGCAACATGTTCAAGTTGTTTATGTGTGCAGTGTGTCAAGTAGAGATAAAACCAGGGGAGGGCGTTTCAATATTTGAGGGTGCACCCAACCCTCGGAAACTGCGTCCTTGGGATGGACCTTTCCTTTGCACAAGTTGTCAAGATAAGAAAGAAGCCATGGAAGGGAAAAAAGCAACAGGTAGACACAGCAGTGGAAGTGATGATGATTAA 1230 0.4504 MSGGTKGEHHQTVPLSVLLQRELASEKIEKPEIVSGQAGQSKKGEDFTLIKTECQRVVGDGVSTFSVFGLFDGHNGTAAAIYSKENLLNNVLIAGFVKTDKDFQEKGQKSGTTVTFVIIEGWVVTVASVGDSRCVLESGEGGLYYLSADHRLETNEEERVRITSSGGEVGRLNTGGGTEVGPLRCWPGGLCLSRSIGDMDIGEFIVPVPYVKQVKLSTAGGRLVICSDGVWDSLSAETVLDSCRGMSAETAASHIVKEAVEAKGLRDDTTCIVVDILPQEKPPAPAPQRKKKGIKSMFRKKSSESSSYNDKDYLEPDVVEELYEEGSAMLSERLDTKYPLCNMFKLFMCAVCQVEIKPGEGVSIFEGAPNPRKLRPWDGPFLCTSCQDKKEAMEGKKATGRHSSGSDDD 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc26g00018 409 Gene3D - 33 282 IPR036457 -
Stsc26g00018 409 MobiDBLite consensus disorder prediction 280 311 - -
Stsc26g00018 409 ProSiteProfiles PPM-type phosphatase domain profile. 30 276 IPR001932 -
Stsc26g00018 409 SMART PP2C_4 24 274 IPR001932 -
Stsc26g00018 409 PANTHER PROTEIN PHOSPHATASE 40 275 IPR015655 GO:0004722|GO:0006470
Stsc26g00018 409 Pfam Protein phosphatase 2C 83 261 IPR001932 -
Stsc26g00018 409 SMART PP2C_SIG_2 49 276 IPR001932 -
Stsc26g00018 409 SUPERFAMILY PP2C-like 35 276 IPR036457 -
Stsc26g00018 409 CDD PP2Cc 34 276 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc26g00018 Stsc-Chr26 105884 111284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc26g00018 5 407 PP2C-type Phosphatase Gene Family AT1G47380 75.176 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc26g00018 - - gmx:100778367 673.7