Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc268g00015 ATGGAGACGAAAAACCCTTCGAGGTTCACGCTGGGGAAGCAGTCATCGATGGCACCAGAACGCCACAGAGAAGCTGGATCAGACCTCCACAATGACGGTGATGGCGAGGAAGGTATCCATCCGGGTGTGAGGTTGATGTATTCGGCGAACGAGGGCGATCTTGATGGTATTCGTGAAGTGTTGGATTCAGGTGTGAGCGTCAATTTCAGGGACATTGATGACCGCACTGCACTTCACGTTGCTGCGTGTCAGGGATTAACCGATGTGGTTGCTTTGTTGCTCGAGAAAGGAGCTGAGGTCGATGCCAAAGATCGCTGGGGGAGCACGCCGCTTGCAGATGCTATATTTTATAAAAACAATGACGTGATCAAACTATTGGAGAAGAGTGGAGCAAAGCCTCTGATGGCTCCTATGCATGTTAATCATGCACGTGAAGTACCAGAATATGAAATCAATACTAAAGAACTTGATTTCACCAATAGTGAGGAGATAACAAAGGGGACTTTCTGTAGTGCAATTTGGCGTGGGACAGAGGTCGCAGTGAAAAAACTTGGGGAGGATGTAATTACTGATGAGGAGAAAGTGAAGGCCTTCAGAGATGAGCTTGCACTATTCCTGAAGATCCGGCATCCAAATGTAGTTCAGTTTCTGGGGGCTGTGACACAGAGTAGCCCAATGATGATCGTGACAGAATATCTTCCAAAGGGCGATCTCCGTGCATTCTTGGGAAGAAAAGGAGCTCTGAAACCATCAACAGCTGTCAAATTTGCACTTGATATTGCCAGGGGAGTGGGTTATTTACATGAGAATAAGCCATCACCAATCATTCACCGTGATCTTGAGCCTTCTAATATATTGCGGGATGATTCGGGACACCTAAAAGTTGCAGACTTTGGGGTTAGCAAGTTGCTTGCAGTTAAAGAAGACAGACCTCTAACTTGCCAAGATACTTCTTGCCGCTATGTTGCTCCTGAAGTTTTCAAACAAGAAGAATATGACACCAAAGTAGATGTATTCTCGTTTGCACTAATCCTGCAAGAGATGATTGAAGGTTGCCCACCATTTTCCGCAAAGAAGGATGAGGAGGTTCCTAAGGTATATGCTGCAAAAGAGCGCCCACCTTTTCGAGCTCCCGCCAAGCGTTATGCCCATGGGATTAGAGAATTGATTGAAGAGTGCTGGAATGAAAATCCAGAAAAGAGACCAAGTTTTAGACAAATAATACCAAGGCTGGAATCCATCTACTACACTATTGGTCAAAAAGGACGTTGGAAGGTATTCATCACCTCGAATTTCTGTTTATCTGCTAGTTTCTATAAGCAGAAAGGTACCAGAAGAAACTAG 1344 0.4524 METKNPSRFTLGKQSSMAPERHREAGSDLHNDGDGEEGIHPGVRLMYSANEGDLDGIREVLDSGVSVNFRDIDDRTALHVAACQGLTDVVALLLEKGAEVDAKDRWGSTPLADAIFYKNNDVIKLLEKSGAKPLMAPMHVNHAREVPEYEINTKELDFTNSEEITKGTFCSAIWRGTEVAVKKLGEDVITDEEKVKAFRDELALFLKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRAFLGRKGALKPSTAVKFALDIARGVGYLHENKPSPIIHRDLEPSNILRDDSGHLKVADFGVSKLLAVKEDRPLTCQDTSCRYVAPEVFKQEEYDTKVDVFSFALILQEMIEGCPPFSAKKDEEVPKVYAAKERPPFRAPAKRYAHGIRELIEECWNENPEKRPSFRQIIPRLESIYYTIGQKGRWKVFITSNFCLSASFYKQKGTRRN 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc268g00015 447 ProSiteProfiles Ankyrin repeat profile. 73 105 IPR002110 GO:0005515
Stsc268g00015 447 Pfam Protein tyrosine and serine/threonine kinase 172 411 IPR001245 GO:0004672|GO:0006468
Stsc268g00015 447 ProSiteProfiles Ankyrin repeat region circular profile. 73 105 - -
Stsc268g00015 447 MobiDBLite consensus disorder prediction 17 39 - -
Stsc268g00015 447 FunFam serine/threonine-protein kinase STY46-like 151 234 - -
Stsc268g00015 447 CDD STKc_MAP3K-like 164 411 - -
Stsc268g00015 447 SUPERFAMILY Ankyrin repeat 44 135 IPR036770 -
Stsc268g00015 447 SUPERFAMILY Protein kinase-like (PK-like) 139 412 IPR011009 -
Stsc268g00015 447 Gene3D - 38 142 IPR036770 -
Stsc268g00015 447 FunFam Os01g0748600 protein 144 430 - -
Stsc268g00015 447 Gene3D Transferase(Phosphotransferase) domain 1 143 426 - -
Stsc268g00015 447 ProSiteProfiles Protein kinase domain profile. 158 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc268g00015 447 SMART ANK_2a 37 69 IPR002110 GO:0005515
Stsc268g00015 447 SMART ANK_2a 106 135 IPR002110 GO:0005515
Stsc268g00015 447 SMART ANK_2a 73 102 IPR002110 GO:0005515
Stsc268g00015 447 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 136 414 - -
Stsc268g00015 447 FunFam Integrin-linked protein kinase family 25 149 - -
Stsc268g00015 447 Pfam Ankyrin repeats (3 copies) 45 133 IPR002110 GO:0005515
Stsc268g00015 447 PIRSF ILK 1 433 - -
Stsc268g00015 447 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc268g00015 Stsc-Chr268 48115 52407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc268g00015 8 438 MAP Kinase Kinase Kinase AT4G18950 68.056 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Stsc268g00015 PK_Tyr_Ser-Thr 5.1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc268g00015 - - gmx:100790126 747.273