Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc266g00007 ATGGTGTTGCCTCAACCGACATGCAATCTCATGTCACCAAAGAATCAACAAGTGGCCCAATCTGAAATCCAGAAGCCTAGTTGGCTTGATGCTTTCCTCGAAAAGAAGTTCTTTGAGCCGTGCGAGGATCATTCGCAGCGCAAGAATGAGGTGAACAAATACTGTATAGACTGTGATCAGGCAGTTTGCGAACATTGCGTTTTATCAGGTCCTCATGATAACCACATCATACTTAAGCTCTACAGACATATTTACAAAGATGTTGTCTCCATTGGTACTATGGATAAGTATATTGACTGCTCAGAAATTCAGCGATACAAGTCCAACAAGCGATTGGTTATTTCTCTGAATCCGCTTCCGCACAGTGGTTCAGCACCAAACAATGAAGCATCATGCAACACCTGTTCTAGAAAGCTGAATGAACCGAATCAATATCGTTACTGCTCCATTTCTTGCAAGGTCAAGGCTATTTCGCCAGAACCTATTGATTTGGTTCCTGCCATTATTCCTGACCAAAACCAGAATGCTACTCAGGAAAGACAGGAGAATCCTCCTCAGGAAGGACAGGAGATTCCTACTCAGGAAAGACCAGAGGAAAAGGCTGAACCTGAACTCCCAAGGCCAAGAAAGCGAAGAAGAAAGGGAATACCCCATAGAGCTCCATTCTTCTAA 672 0.4375 MVLPQPTCNLMSPKNQQVAQSEIQKPSWLDAFLEKKFFEPCEDHSQRKNEVNKYCIDCDQAVCEHCVLSGPHDNHIILKLYRHIYKDVVSIGTMDKYIDCSEIQRYKSNKRLVISLNPLPHSGSAPNNEASCNTCSRKLNEPNQYRYCSISCKVKAISPEPIDLVPAIIPDQNQNATQERQENPPQEGQEIPTQERPEEKAEPELPRPRKRRRKGIPHRAPFF 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc266g00007 223 CDD Bbox2 41 80 - -
Stsc266g00007 223 Pfam PLATZ transcription factor 82 154 IPR006734 -
Stsc266g00007 223 Gene3D Classic Zinc Finger 34 80 - -
Stsc266g00007 223 MobiDBLite consensus disorder prediction 174 190 - -
Stsc266g00007 223 MobiDBLite consensus disorder prediction 174 223 - -
Stsc266g00007 223 SUPERFAMILY B-box zinc-binding domain 40 80 - -
Stsc266g00007 223 MobiDBLite consensus disorder prediction 192 209 - -
Stsc266g00007 223 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 19 222 - -
Stsc266g00007 223 ProSiteProfiles Zinc finger B-box type profile. 41 80 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc266g00007 Stsc-Chr266 40818 43794 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Stsc266g00007 PLATZ 2.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc266g00007 - - adu:107457969 337.035