Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc265g00008 ATGGAAAACATAGAAGAAATAATGAATGCTAATTTTCCAGTCATACTGCAGAGCGACAAGTTAGCAAAGTATATAGTGGAAACTGCTGTTTACCCTCGCGAGGCACAGCTTCTTAAAGAGCTGAGGGAACGAACTGAGAATTATCCTCGGGGCAACATGGGTACAAGTCCTGATTCAGGCCAACTAATCTCAATATTGTTGAAGCTCTTAAATGCCAAAAAGACAATTGAAATTGGAGTGTTTACAGGCTACTCTCTTCTTCTCACAGCTCTCAACATTCCTCATGATGGAAAAATTACAGCCATAGATATTGACAGAAAAGCTTACGAGGTTGGGTTACCATTTATAAAAAAGGCTGGAGTAGAGCACAAGATTGATTTTATAGAGTCTCCAGCACTACCAATTTTGGACAAACTAGTGCAAGATCCTTCAAACTTGGGAACCTATGACTTTGCCTTCATTGATGCTGACAAATGGAGCTACATGAACTACCATGAGAGGCTCATAAAACTGGTGAAGGTTGGTGGGTTGCTTGCGTATGATGACACACTCTTAGGTGGGTTTGTTGTGTGGCCTGAAGAGGATGTTGAAGCTGTTCACAGACCATTCAGAAAAGCTGCCATTGAAGTCAACCAAGCACTCGCCAACGACCATCGTGTCGAAATCGCTCTTACTCCTGTAGGAGATGGACTCACCATTTGCAGGCGCATTGCTTGA 717 0.4268 MENIEEIMNANFPVILQSDKLAKYIVETAVYPREAQLLKELRERTENYPRGNMGTSPDSGQLISILLKLLNAKKTIEIGVFTGYSLLLTALNIPHDGKITAIDIDRKAYEVGLPFIKKAGVEHKIDFIESPALPILDKLVQDPSNLGTYDFAFIDADKWSYMNYHERLIKLVKVGGLLAYDDTLLGGFVVWPEEDVEAVHRPFRKAAIEVNQALANDHRVEIALTPVGDGLTICRRIA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc265g00008 238 Pfam O-methyltransferase 28 237 IPR002935 GO:0008171
Stsc265g00008 238 CDD AdoMet_MTases 76 185 - -
Stsc265g00008 238 PANTHER O-METHYLTRANSFERASE-RELATED 14 237 - -
Stsc265g00008 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 19 236 IPR029063 -
Stsc265g00008 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
Stsc265g00008 238 Gene3D Vaccinia Virus protein VP39 5 238 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc265g00008 Stsc-Chr265 25676 29530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc265g00008 15 237 Monolignol Biosynthesis Gene Families AT4G26220 58.296 9.08e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc265g00008 K00588 - gmx:100800911 338.191